RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 C6orf222P0C671 652 aaPredicted RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 JMJD7P0C870 316 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 DEUP1Q05D60 604 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 KRT71Q3SY84 523 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CEP55Q53EZ4 464 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 SMUG1Q53HV7 270 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 IQSEC1Q6DN90 963 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ISLR2Q6UXK2 745 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 NUDT18Q6ZVK8 323 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ARMC9Q7Z3E5 817 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 LRRC47Q8N1G4 583 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 TMEM57Q8N5G2 664 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 RASSF8Q8NHQ8 419 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CCHCR1Q8TD31 782 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 NOC3LQ8WTT2 800 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 TATDN2Q93075 761 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 FAXDC2Q96IV6 333 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CRBNQ96SW2 442 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 TACO1Q9BSH4 297 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 CRACR2AQ9BSW2 395 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 TMEM120AQ9BXJ8 343 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ACPTQ9BZG2 426 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ATP13A1Q9HD20 1204 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CARMIL2Q6F5E8 1435 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 A0A0G2JPF8 293 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 TMEM229AB2RXF0 380 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 HNRNPCL3B7ZW38 293 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 FMO6PO60774 539 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 SLC34A2O95436 690 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 HNRNPCL4P0DMR1 293 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 PDHBP11177 359 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ALAS2P22557 587 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 MAPK10P53779 464 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ZBTB16Q05516 673 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 NR5A1Q13285 461 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ADAM15Q13444 863 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CAMK2GQ13555 558 aaPredicted RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 COG2Q14746 738 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 C1orf141Q5JVX7 400 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 ELMSAN1Q6PJG2 1045 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 LYPD8Q6UX82 237 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 DGLUCYQ7Z3D6 616 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 LRRTM4Q86VH4 590 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CPOQ8IVL8 374 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 RBM12BQ8IXT5 1001 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 BBOF1Q8ND07 529 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 CEP76Q8TAP6 659 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 DIS3LQ8TF46 1054 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 HTRA1Q92743 480 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 TREX2Q9BQ50 279 aaPredicted RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 NACAP1Q9BZK3 213 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 PNNQ9H307 717 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 NCOR1P1Q9H4R4 102 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 DMRT3Q9NQL9 472 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 AATFQ9NY61 560 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMG1-207ENST00000563235 CABP1Q9NZU7 370 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 MTUS1Q9ULD2 1270 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 APOBEC2Q9Y235 224 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 SMG6Q86US8 1419 aaKnown RBP5.23□□□□□ -1.57
SMG1-207ENST00000563235 EFCAB5A4FU69 1503 aa5.23□□□□□ -1.57
SMG1-207ENST00000563235 LRRC14BA6NHZ5 514 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 ZNF891A8MT65 544 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 SGK1O00141 431 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 TSC22D2O75157 780 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 MYCLP12524 364 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 POU3F2P20265 443 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 MRPS5P82675 430 aaKnown RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 PWP1Q13610 501 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 ERV3-1Q14264 604 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 LONRF2Q1L5Z9 754 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 SUPT20HL1Q3ZLR7 823 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 SNAP47Q5SQN1 464 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 SLC7A14Q8TBB6 771 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 TBC1D22AQ8WUA7 517 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 HDAC7Q8WUI4 952 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 BSNDQ8WZ55 320 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 LRRC59Q96AG4 307 aaKnown RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 ZDHHC15Q96MV8 337 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 MAGEH1Q9H213 219 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 MRPL46Q9H2W6 279 aaKnown RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 PDE7BQ9NP56 450 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 ARHGEF4Q9NR80 690 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 ORC3Q9UBD5 711 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 FAM153AQ9UHL3 310 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 TMED5Q9Y3A6 229 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 PTPRKQ15262 1439 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 VPS8Q8N3P4 1428 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 ERAL1O75616 437 aaKnown RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 PALMO75781 387 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 PGM3O95394 542 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 F12P00748 615 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 NPPAP01160 153 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 C6P13671 934 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 ADSLP30566 484 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 SOX6P35712 828 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 USP8P40818 1118 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 PPP5CP53041 499 aa5.22□□□□□ -1.57
SMG1-207ENST00000563235 NRG1Q02297 640 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 NMIQ13287 307 aaPredicted RBP5.22□□□□□ -1.57
SMG1-207ENST00000563235 BLMHQ13867 455 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms