RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MASTLQ96GX5 879 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 RABEP2Q9H5N1 569 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 AGPAT3Q9NRZ7 376 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 SLC12A6Q9UHW9 1150 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 LOXHD1Q8IVV2 1947 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 PFASO15067 1338 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 GMNCA6NCL1 334 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 SFI1A8K8P3 1242 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 MIF4GDA9UHW6 222 aaKnown RBP14.19□□□□□ -0.14
USB1-207ENST00000563149 MYO1FO00160 1098 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 PPFIA2O75334 1257 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 FGGP02679 453 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 POLR2MP0CAP2 368 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 MAPTP10636 758 aaKnown RBP14.19□□□□□ -0.14
USB1-207ENST00000563149 BCRP11274 1271 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 ITGA4P13612 1032 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
USB1-207ENST00000563149 GBP1P32455 592 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 RBM5P52756 815 aaKnown RBP eCLIP14.19□□□□□ -0.14
USB1-207ENST00000563149 ALCAMQ13740 583 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 SHROOM1Q2M3G4 852 aaPredicted RBP14.19□□□□□ -0.14
USB1-207ENST00000563149 DACT2Q5SW24 774 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 CNPY4Q8N129 248 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 MORC4Q8TE76 937 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 WDR18Q9BV38 432 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 STRA6Q9BX79 667 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 GPR88Q9GZN0 384 aa14.19□□□□□ -0.14
USB1-207ENST00000563149 E7EVH7 732 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 GDF11O95390 407 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 STAT2P52630 851 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 CACNB3P54284 484 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
USB1-207ENST00000563149 MYL7Q01449 175 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 BFSP1Q12934 665 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 PLCB4Q15147 1175 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 ZC2HC1CQ53FD0 456 aaPredicted RBP14.18□□□□□ -0.14
USB1-207ENST00000563149 DUPD1Q68J44 220 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 CROCCP2Q86T23 111 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 DNAAF5Q86Y56 855 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 KIAA0825Q8IV33 1275 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 TXLNGYQ9BZA5 131 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 CNOT10Q9H9A5 744 aaKnown RBP14.18□□□□□ -0.14
USB1-207ENST00000563149 OSGEPQ9NPF4 335 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 RASAL2Q9UJF2 1139 aa14.18□□□□□ -0.14
USB1-207ENST00000563149 TRAPPC3O43617 180 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 GAS7O60861 476 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 GGPS1O95749 300 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 GH2P01242 217 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 KRT13P13646 458 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 DHX9Q08211 1270 aaKnown RBP14.17□□□□□ -0.14
USB1-207ENST00000563149 CETN1Q12798 172 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 CBWD6Q4V339 395 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 CBWD3Q5JTY5 395 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 CBWD5Q5RIA9 395 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 C11orf63Q6NUN7 778 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 C6orf89Q6UWU4 347 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 SEPT12Q8IYM1 358 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 PRPF38AQ8NAV1 312 aaKnown RBP14.17□□□□□ -0.14
USB1-207ENST00000563149 CENPTQ96BT3 561 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 FMO2Q99518 471 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 AGPAT1Q99943 283 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 ERP44Q9BS26 406 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 BCAS3Q9H6U6 928 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 TMEM206Q9H813 350 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 ARHGEF10LQ9HCE6 1279 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 HERC5Q9UII4 1024 aaKnown RBP14.17□□□□□ -0.14
USB1-207ENST00000563149 PPP1R9AQ9ULJ8 1098 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
USB1-207ENST00000563149 C5orf60A6NFR6 353 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 PLA2G6O60733 806 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 HPDP32754 393 aaPredicted RBP14.17□□□□□ -0.14
USB1-207ENST00000563149 FLT3P36888 993 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 FNTAP49354 379 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 DR1Q01658 176 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 CEP55Q53EZ4 464 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 ODF2Q5BJF6 829 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 ODR4Q5SWX8 454 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 B3GNT9Q6UX72 402 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 INTS8Q75QN2 995 aaKnown RBP14.17□□□□□ -0.14
USB1-207ENST00000563149 HOOK3Q86VS8 718 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 C12orf56Q8IXR9 622 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 OR2W6PQ8NHA6 318 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 TEKT3Q9BXF9 490 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 CENPHQ9H3R5 247 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 DBNDD1Q9H9R9 158 aa14.17□□□□□ -0.14
USB1-207ENST00000563149 RBBP6Q7Z6E9 1792 aaKnown RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 SYNGAP1Q96PV0 1343 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 MAPK13O15264 365 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 PMM2O15305 246 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 EXOC3O60645 756 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 CFBP00751 764 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 VIL1P09327 827 aaKnown RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 NUDT17P0C025 328 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 POLD1P28340 1107 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 CYP2J2P51589 502 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 SEC24CP53992 1094 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 SNRPFP62306 86 aaKnown RBP14.16□□□□□ -0.14
USB1-207ENST00000563149 COG2Q14746 738 aa14.16□□□□□ -0.14
USB1-207ENST00000563149 PTPROQ16827 1216 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms