RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 KCNG1Q9UIX4 513 aa20.82■□□□□ 0.92
RAB40C-207ENST00000563109 LRRIQ4A6NIV6 560 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 GPR32O75388 356 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 CHRNA1P02708 482 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 MYL1P05976 194 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 SRGAP2CP0DJJ0 459 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 IDEP14735 1019 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 NAMPTP43490 491 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 MAPK7Q13164 816 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 SNW1Q13573 536 aaKnown RBP20.81■□□□□ 0.92
RAB40C-207ENST00000563109 CAPSQ13938 189 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 MFSD5Q6N075 450 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 KSR1Q8IVT5 923 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 ZBTB8OSQ8IWT0 167 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 CCDC65Q8IXS2 484 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 DEPTORQ8TB45 409 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 ZNF668Q96K58 619 aaPredicted RBP20.81■□□□□ 0.92
RAB40C-207ENST00000563109 C7orf25Q9BPX7 421 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 PARVGQ9HBI0 331 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 LARSQ9P2J5 1176 aaKnown RBP20.81■□□□□ 0.92
RAB40C-207ENST00000563109 DNAH12Q6ZR08 3092 aa20.81■□□□□ 0.92
RAB40C-207ENST00000563109 A0A087WZ62 844 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 PLS3P13797 630 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 GAP43P17677 238 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 MCM4P33991 863 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 MLLT1Q03111 559 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-207ENST00000563109 TRAF7Q6Q0C0 670 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 GRAMD1CQ8IYS0 662 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 DAW1Q8N136 415 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 MYCT1Q8N699 235 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 USP38Q8NB14 1042 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 SCLYQ96I15 445 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 FDXACB1Q9BRP7 624 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-207ENST00000563109 INO80BQ9C086 356 aaPredicted RBP20.8■□□□□ 0.92
RAB40C-207ENST00000563109 ADAMTS10Q9H324 1103 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 POLD4Q9HCU8 107 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 DACT1Q9NYF0 836 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 SCN5AQ14524 2016 aa20.8■□□□□ 0.92
RAB40C-207ENST00000563109 CCDC169A6NNP5 214 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 GTPBP6O43824 516 aaPredicted RBP20.79■□□□□ 0.92
RAB40C-207ENST00000563109 PTMSP20962 102 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 ITGB8P26012 769 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 SMTNP53814 917 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 PEX3P56589 373 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 POU5F1BQ06416 359 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 PPIGQ13427 754 aaKnown RBP eCLIP20.79■□□□□ 0.92
RAB40C-207ENST00000563109 FBXO47Q5MNV8 452 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 ODR4Q5SWX8 454 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 CNNM4Q6P4Q7 775 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 BSNDQ8WZ55 320 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 DNAJC19Q96DA6 116 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 C2orf40Q9H1Z8 148 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 BLZF1Q9H2G9 400 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 KMT5AQ9NQR1 393 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 SEL1LQ9UBV2 794 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 SQORQ9Y6N5 450 aa20.79■□□□□ 0.92
RAB40C-207ENST00000563109 SFI1A8K8P3 1242 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 H0YCG3 227 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 MBD3O95983 291 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 GHRP10912 638 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 DARSP14868 501 aaKnown RBP20.78■□□□□ 0.92
RAB40C-207ENST00000563109 SFPQP23246 707 aaKnown RBP eCLIP20.78■□□□□ 0.92
RAB40C-207ENST00000563109 EIF4BP23588 611 aaKnown RBP20.78■□□□□ 0.92
RAB40C-207ENST00000563109 ZNF131P52739 623 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 FPGSQ05932 587 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 CUL4BQ13620 913 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 POSTNQ15063 836 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 TSHZ1Q6ZSZ6 1077 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 SRGAP1Q7Z6B7 1085 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 BADQ92934 168 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 CCDC47Q96A33 483 aaKnown RBP20.78■□□□□ 0.92
RAB40C-207ENST00000563109 NFKBIZQ9BYH8 718 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 PANK4Q9NVE7 773 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 PHLPP2Q6ZVD8 1323 aa20.78■□□□□ 0.92
RAB40C-207ENST00000563109 RPS6KA5O75582 802 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 PFKMP08237 780 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 CSF2RAP15509 400 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 NPTX2P47972 431 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 PAK2Q13177 524 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 LPIN1Q14693 890 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 CDCA2Q69YH5 1023 aaPredicted RBP20.77■□□□□ 0.92
RAB40C-207ENST00000563109 UNC13DQ70J99 1090 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 DEFB128Q7Z7B8 93 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 FAM178BQ8IXR5 827 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 RPUSD2Q8IZ73 545 aaKnown RBP20.77■□□□□ 0.92
RAB40C-207ENST00000563109 SLC17A8Q8NDX2 589 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 SPIRE2Q8WWL2 714 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 CDHR5Q9HBB8 845 aa20.77■□□□□ 0.92
RAB40C-207ENST00000563109 FRMD3A2A2Y4 597 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 INO80B-WBP1J3KQ70 363 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 K7ENM7 598 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 NBNO60934 754 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 PRR29P0C7W0 189 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 CASP1P29466 404 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 EFNA5P52803 228 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 PTENP60484 403 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 COASYQ13057 564 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 MBTPS1Q14703 1052 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 HERC4Q5GLZ8 1057 aaPredicted RBP20.76■□□□□ 0.91
RAB40C-207ENST00000563109 SFR1Q86XK3 245 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms