RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 GCOM2Q9BZD3 368 aaPredicted RBP10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 ATP6V0A4Q9HBG4 840 aa10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 ERVK-5Q9HDB9 667 aa10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 AAASQ9NRG9 546 aa10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 SUCLA2Q9P2R7 463 aaPredicted RBP10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 KIF3AQ9Y496 699 aa10.41□□□□□ -0.74
CHRFAM7A-204ENST00000562729 NLRC5Q86WI3 1866 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TMEM150BA6NC51 233 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TBKBP1A7MCY6 615 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 H3BNC9 293 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 EDIL3O43854 480 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 LPXNO60711 386 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 GPR32O75388 356 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 DGKIO75912 1065 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 RB1P06400 928 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 COL9A1P20849 921 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 SFPQP23246 707 aaKnown RBP eCLIP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 EIF4BP23588 611 aaKnown RBP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 MCM7P33993 719 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 BMPR1AP36894 532 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TXKP42681 527 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 CYP4A11Q02928 519 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TFF2Q03403 129 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 RABEP1Q15276 862 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 XKR9Q5GH70 373 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 FAM228AQ86W67 206 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 CMTR2Q8IYT2 770 aaKnown RBP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TMEM40Q8WWA1 233 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 PPP2R3CQ969Q6 453 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 MRPL38Q96DV4 380 aaKnown RBP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 LXNQ9BS40 222 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 INO80BQ9C086 356 aaPredicted RBP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TMX1Q9H3N1 280 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 TTC12Q9H892 705 aaPredicted RBP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 KCNMB3Q9NPA1 279 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 CYP26B1Q9NR63 512 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 RGS18Q9NS28 235 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 VAV3Q9UKW4 847 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 NOL7Q9UMY1 257 aaKnown RBP10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 PCDHB12Q9Y5F1 795 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 WDR81Q562E7 1941 aa10.4□□□□□ -0.74
CHRFAM7A-204ENST00000562729 RALGAPA2Q2PPJ7 1873 aa10.4□□□□□ -0.75
CHRFAM7A-204ENST00000562729 EML1O00423 815 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 HOXA2O43364 376 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MAFO75444 373 aaPredicted RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 YWHABP31946 246 aaKnown RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 RFC5P40937 340 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 RBM25P49756 843 aaKnown RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 GPC3P51654 580 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 CTTNQ14247 550 aaKnown RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 EPHA7Q15375 998 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 EARS2Q5JPH6 523 aaKnown RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ANO5Q75V66 913 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 RTN4RL1Q86UN2 441 aaPredicted RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ADAMTS19Q8TE59 1207 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 TCP11Q8WWU5 503 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 LINC01599Q8WXQ3 324 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 HAS1Q92839 578 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 DYDC2Q96IM9 177 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 DACT1Q9NYF0 836 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 PPME1Q9Y570 386 aa10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MRPL42Q9Y6G3 142 aaKnown RBP10.39□□□□□ -0.75
CHRFAM7A-204ENST00000562729 COL4A6Q14031 1691 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 A0A087WZ62 844 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MGEA5O60502 916 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 SRGAP2CP0DJJ0 459 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 DARSP14868 501 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 FGFR4P22455 802 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 NPEPPSP55786 919 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 NCBP1Q09161 790 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 TARBP2Q15633 366 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 TWF2Q6IBS0 349 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 CATSPER4Q7RTX7 472 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ZNF410Q86VK4 478 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ANKK1Q8NFD2 765 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ERMNQ8TAM6 284 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 NEK9Q8TD19 979 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 PSPC1Q8WXF1 523 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ZNF689Q96CS4 500 aaPredicted RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 UHRF1Q96T88 793 aaPredicted RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 MTRQ99707 1265 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 EIF2AK1Q9BQI3 630 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 FDXACB1Q9BRP7 624 aaPredicted RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 PLVAPQ9BX97 442 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 LMAN2LQ9H0V9 348 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ADAMTS10Q9H324 1103 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 FOXP1Q9H334 677 aaPredicted RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 NSUN3Q9H649 340 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 ALG13Q9NP73 1137 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 TMEM161AQ9NX61 479 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 RGL1Q9NZL6 768 aa10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 PIN4Q9Y237 131 aaKnown RBP10.38□□□□□ -0.75
CHRFAM7A-204ENST00000562729 PRRC2BQ5JSZ5 2229 aaKnown RBP10.37□□□□□ -0.75
CHRFAM7A-204ENST00000562729 C5orf67F2Z3F1 127 aa10.37□□□□□ -0.75
CHRFAM7A-204ENST00000562729 H3BQV1 296 aa10.37□□□□□ -0.75
CHRFAM7A-204ENST00000562729 GAS2O43903 313 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms