RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 MTERF2Q49AM1 385 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 XKR3Q5GH77 459 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-205ENST00000562707 MIER3Q7Z3K6 550 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 KREMEN2Q8NCW0 462 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 RDM1Q8NG50 284 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 KCNB2Q92953 911 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 RIPOR3Q96MK2 946 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 C22orf23Q9BZE7 217 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 INO80BQ9C086 356 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-205ENST00000562707 SEPT9Q9UHD8 586 aaPredicted RBP18.67■□□□□ 0.58
CMTM3-205ENST00000562707 SNX14Q9Y5W7 946 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 NID2Q14112 1375 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 PLXNA4Q9HCM2 1894 aa18.67■□□□□ 0.58
CMTM3-205ENST00000562707 CSDE1O75534 798 aaKnown RBP18.66■□□□□ 0.58
CMTM3-205ENST00000562707 SKIP12755 728 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 IFNAR1P17181 557 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
CMTM3-205ENST00000562707 RPS6KB1P23443 525 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 NTRK3Q16288 839 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 UBALD2Q8IYN6 164 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 VPS52Q8N1B4 723 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 FBXL16Q8N461 479 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 NIFKQ9BYG3 293 aaKnown RBP18.66■□□□□ 0.58
CMTM3-205ENST00000562707 SH3GLB2Q9NR46 395 aa18.66■□□□□ 0.58
CMTM3-205ENST00000562707 EDIL3O43854 480 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 ST18O60284 1047 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 PSMA5P28066 241 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 HSPA4P34932 840 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 PHKA2P46019 1235 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 NUBP1P53384 320 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 DRP2Q13474 957 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 MTMR3Q13615 1198 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 GIT2Q14161 759 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 TWF2Q6IBS0 349 aaKnown RBP18.65■□□□□ 0.58
CMTM3-205ENST00000562707 GLB1LQ6UWU2 654 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 POMKQ9H5K3 350 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 DZANK1Q9NVP4 752 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 SUCLA2Q9P2R7 463 aaPredicted RBP18.65■□□□□ 0.58
CMTM3-205ENST00000562707 SORCS3Q9UPU3 1222 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 ZNF318Q5VUA4 2279 aa18.65■□□□□ 0.58
CMTM3-205ENST00000562707 WDFY4Q6ZS81 3184 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 A0A087WZ62 844 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 DDX11L8A8MPP1 907 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 C2CD4DB7Z1M9 353 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 ZC3H11AO75152 810 aaKnown RBP eCLIP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 PSMD10O75832 226 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 POLGP54098 1239 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 CCT2P78371 535 aaKnown RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 Q4G0T1 1027 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 ATAT1Q5SQI0 421 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 RARS2Q5T160 578 aaKnown RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 ZNF410Q86VK4 478 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 TRIM22Q8IYM9 498 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 ATOH1Q92858 354 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 GJA10Q969M2 543 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 FDXACB1Q9BRP7 624 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 AGXT2Q9BYV1 514 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 CDH22Q9UJ99 828 aa18.64■□□□□ 0.57
CMTM3-205ENST00000562707 PIN4Q9Y237 131 aaKnown RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 FNDC1Q4ZHG4 1894 aaPredicted RBP18.64■□□□□ 0.57
CMTM3-205ENST00000562707 LOXHD1Q8IVV2 1947 aa18.63■□□□□ 0.57
CMTM3-205ENST00000562707 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-205ENST00000562707 PDIA3P30101 505 aaKnown RBP18.63■□□□□ 0.57
CMTM3-205ENST00000562707 RNASELQ05823 741 aaKnown RBP18.63■□□□□ 0.57
CMTM3-205ENST00000562707 DDX53Q86TM3 631 aaKnown RBP18.63■□□□□ 0.57
CMTM3-205ENST00000562707 RHPN2Q8IUC4 686 aa18.63■□□□□ 0.57
CMTM3-205ENST00000562707 JPH2Q9BR39 696 aaPredicted RBP18.63■□□□□ 0.57
CMTM3-205ENST00000562707 ZBP1Q9H171 429 aa18.63■□□□□ 0.57
CMTM3-205ENST00000562707 NCOA5Q9HCD5 579 aaKnown RBP18.63■□□□□ 0.57
CMTM3-205ENST00000562707 FAM86C1Q9NVL1 165 aa18.63■□□□□ 0.57
CMTM3-205ENST00000562707 PCDHA4Q9UN74 947 aa18.63■□□□□ 0.57
CMTM3-205ENST00000562707 TRIOO75962 3097 aa18.63■□□□□ 0.57
CMTM3-205ENST00000562707 CYP3A7-CYP3A51PA0A087WV96 503 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 IGKV6-21A0A0C4DH24 114 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 MAFO75444 373 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-205ENST00000562707 PDGFBP01127 241 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-205ENST00000562707 WEE2P0C1S8 567 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 CTSAP10619 480 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 CYP3A7P24462 503 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 RAB27AP51159 221 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 SSRP1Q08945 709 aaKnown RBP18.62■□□□□ 0.57
CMTM3-205ENST00000562707 LONRF3Q496Y0 759 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 NOMO2Q5JPE7 1267 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 CATSPER4Q7RTX7 472 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 C12orf76Q8N812 135 aaPredicted RBP18.62■□□□□ 0.57
CMTM3-205ENST00000562707 TDRD5Q8NAT2 981 aaKnown RBP18.62■□□□□ 0.57
CMTM3-205ENST00000562707 AUTS2Q8WXX7 1259 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 LPPQ93052 612 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 PGBD4Q96DM1 585 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 IGSF21Q96ID5 467 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 SH2D3AQ9BRG2 576 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 FAM105AQ9NUU6 356 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 DBR1Q9UK59 544 aaKnown RBP18.62■□□□□ 0.57
CMTM3-205ENST00000562707 INPP5FQ9Y2H2 1132 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 IRAK3Q9Y616 596 aa18.62■□□□□ 0.57
CMTM3-205ENST00000562707 TMEM150BA6NC51 233 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms