RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 GCOM2Q9BZD3 368 aaPredicted RBP12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 CWH43Q9H720 699 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 ELAC1Q9H777 363 aaKnown RBP12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 TMEM161AQ9NX61 479 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 PLAGL2Q9UPG8 496 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 COL4A3BPQ9Y5P4 624 aa12.39□□□□□ -0.43
LPCAT4-202ENST00000562404 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 OR52Z1P0C646 297 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 GTF2F1P35269 517 aaKnown RBP eCLIP12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 IRS1P35568 1242 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 RFC5P40937 340 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 RARRES1P49788 294 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 DNM2P50570 870 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 LAMTOR4Q0VGL1 99 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 IL17AQ16552 155 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 ZNF410Q86VK4 478 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 ZNF710Q8N1W2 664 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 SPPL3Q8TCT6 385 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 NECAB3Q96P71 396 aaPredicted RBP12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 TYW1Q9NV66 732 aaKnown RBP12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 PCDHGC5Q9Y5F6 944 aa12.38□□□□□ -0.43
LPCAT4-202ENST00000562404 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 ZSCAN20P17040 1043 aaPredicted RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 PBX3P40426 434 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 LONRF3Q496Y0 759 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 RNF169Q8NCN4 708 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 NEK9Q8TD19 979 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 PSPC1Q8WXF1 523 aaKnown RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 LPPQ93052 612 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 P2RX5Q93086 422 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 HLA-CQ95604 372 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 MTRQ99707 1265 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 C11orf84Q9BUA3 381 aaPredicted RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 UBE2ZQ9H832 354 aaPredicted RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 UPF2Q9HAU5 1272 aaKnown RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 GPRC5CQ9NQ84 441 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 PIN4Q9Y237 131 aaKnown RBP12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
LPCAT4-202ENST00000562404 SFPQP23246 707 aaKnown RBP eCLIP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 HOXA11P31270 313 aaPredicted RBP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 ARL2P36404 184 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 PHKA2P46019 1235 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 TRAPPC10P48553 1259 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 CDC42EP1Q00587 391 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 HYAL1Q12794 435 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 PTGDRQ13258 359 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 CAPSQ13938 189 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 PTPROQ16827 1216 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 FAM43BQ6ZT52 329 aaPredicted RBP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 CATSPER4Q7RTX7 472 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 ADGRD2Q7Z7M1 963 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 ADAMTS19Q8TE59 1207 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 POLR3CQ9BUI4 534 aaPredicted RBP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 TMEM117Q9H0C3 514 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 NSUN3Q9H649 340 aaKnown RBP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 AGPAT5Q9NUQ2 364 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 COG5Q9UP83 839 aa12.36□□□□□ -0.43
LPCAT4-202ENST00000562404 TDRD15B5MCY1 1934 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 PP2D1A8MPX8 630 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 LINC01565O15544 149 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 B4GALT3O60512 393 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 USO1O60763 962 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 DGAT1O75907 488 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 GLRA2P23416 452 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 RPA1P27694 616 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 CDC25AP30304 524 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 LTBRP36941 435 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 FXR2P51116 673 aaKnown RBP eCLIP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 DLX2Q07687 328 aaPredicted RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 ORC2Q13416 577 aaPredicted RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 COL19A1Q14993 1142 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 AMHR2Q16671 573 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 TWF2Q6IBS0 349 aaKnown RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
LPCAT4-202ENST00000562404 TCP11Q8WWU5 503 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms