RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 TWF2Q6IBS0 349 aaKnown RBP19.88■□□□□ 0.77
CMTM3-204ENST00000562357 ADAMTS19Q8TE59 1207 aa19.88■□□□□ 0.77
CMTM3-204ENST00000562357 TMEM143Q96AN5 459 aa19.88■□□□□ 0.77
CMTM3-204ENST00000562357 HSD17B14Q9BPX1 270 aa19.88■□□□□ 0.77
CMTM3-204ENST00000562357 TMEM117Q9H0C3 514 aa19.88■□□□□ 0.77
CMTM3-204ENST00000562357 TMEM60Q9H2L4 133 aa19.88■□□□□ 0.77
CMTM3-204ENST00000562357 PIN4Q9Y237 131 aaKnown RBP19.88■□□□□ 0.77
CMTM3-204ENST00000562357 A0A0U1RQF3 1178 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 POTEMA6NI47 508 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 WNT7AO00755 349 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 NCK2O43639 380 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 CSDE1O75534 798 aaKnown RBP19.87■□□□□ 0.77
CMTM3-204ENST00000562357 DGAT1O75907 488 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 SRGAP2CP0DJJ0 459 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 LAG3P18627 525 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 ECHDC2Q86YB7 292 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 KSR1Q8IVT5 923 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 LRRC43Q8N309 656 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 ZNF579Q8NAF0 562 aaKnown RBP19.87■□□□□ 0.77
CMTM3-204ENST00000562357 PRPF31Q8WWY3 499 aaKnown RBP19.87■□□□□ 0.77
CMTM3-204ENST00000562357 TMX3Q96JJ7 454 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 UHRF1Q96T88 793 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-204ENST00000562357 UBE2ZQ9H832 354 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-204ENST00000562357 PLAGL2Q9UPG8 496 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 NLRC5Q86WI3 1866 aa19.87■□□□□ 0.77
CMTM3-204ENST00000562357 CSPG5O95196 566 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 EOMESO95936 686 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 TECP42680 631 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 PHKA2P46019 1235 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 RAB27AP51159 221 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 LAMTOR4Q0VGL1 99 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 TFDP1Q14186 410 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 MXD4Q14582 209 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-204ENST00000562357 TCEAL5Q5H9L2 206 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 HAUS3Q68CZ6 603 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 EP400NLQ6ZTU2 488 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 SRGAP1Q7Z6B7 1085 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 KLHL23Q8NBE8 558 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 RSPH1Q8WYR4 309 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 TBC1D32Q96NH3 1257 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 TUFT1Q9NNX1 390 aa19.86■□□□□ 0.77
CMTM3-204ENST00000562357 ALG13Q9NP73 1137 aaKnown RBP19.86■□□□□ 0.77
CMTM3-204ENST00000562357 H3BQV1 296 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 ERLIN2O94905 339 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
CMTM3-204ENST00000562357 KCNA5P22460 613 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 KCNQ1P51787 676 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 MCTP1Q6DN14 999 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 THNSL1Q8IYQ7 743 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 RNF149Q8NC42 400 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 MRPL9Q9BYD2 267 aaKnown RBP19.85■□□□□ 0.77
CMTM3-204ENST00000562357 RAB34Q9BZG1 259 aa19.85■□□□□ 0.77
CMTM3-204ENST00000562357 TYW1Q9NV66 732 aaKnown RBP19.85■□□□□ 0.77
CMTM3-204ENST00000562357 ZBTB39O15060 712 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 ITGB1P05556 798 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 U2AF2P26368 475 aaKnown RBP eCLIP19.84■□□□□ 0.77
CMTM3-204ENST00000562357 RARRES1P49788 294 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 UBE3AQ05086 875 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 NCBP1Q09161 790 aaKnown RBP19.84■□□□□ 0.77
CMTM3-204ENST00000562357 NACC1Q96RE7 527 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 IFT122Q9HBG6 1241 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 SMC3Q9UQE7 1217 aa19.84■□□□□ 0.77
CMTM3-204ENST00000562357 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-204ENST00000562357 TNFRSF10AO00220 468 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 BMP1P13497 986 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 PPM1AP35813 382 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 PCBP1Q15365 356 aaKnown RBP eCLIP19.83■□□□□ 0.77
CMTM3-204ENST00000562357 COLGALT1Q8NBJ5 622 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 PIGOQ8TEQ8 1089 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 POF1BQ8WVV4 589 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 PGBD4Q96DM1 585 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 PABPC5Q96DU9 382 aaKnown RBP19.83■□□□□ 0.77
CMTM3-204ENST00000562357 ZNF558Q96NG5 402 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 POLR3CQ9BUI4 534 aaPredicted RBP19.83■□□□□ 0.77
CMTM3-204ENST00000562357 TRAIPQ9BWF2 469 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 AGPAT5Q9NUQ2 364 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 PUF60Q9UHX1 559 aaKnown RBP19.83■□□□□ 0.77
CMTM3-204ENST00000562357 STK24Q9Y6E0 443 aa19.83■□□□□ 0.77
CMTM3-204ENST00000562357 TTC28Q96AY4 2481 aa19.83■□□□□ 0.76
CMTM3-204ENST00000562357 LAD1O00515 517 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 USO1O60763 962 aaKnown RBP19.82■□□□□ 0.76
CMTM3-204ENST00000562357 GJB2P29033 226 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 GLB1LQ6UWU2 654 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 ZNF598Q86UK7 904 aaKnown RBP19.82■□□□□ 0.76
CMTM3-204ENST00000562357 CATSPER3Q86XQ3 398 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 MCPH1Q8NEM0 835 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 SPPL3Q8TCT6 385 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 HELQQ8TDG4 1101 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 MICAL1Q8TDZ2 1067 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 CASD1Q96PB1 797 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 FAM105AQ9NUU6 356 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 CLDND1Q9NY35 253 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 FAM50BQ9Y247 325 aa19.82■□□□□ 0.76
CMTM3-204ENST00000562357 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.81■□□□□ 0.76
CMTM3-204ENST00000562357 CARNS1A5YM72 827 aa19.81■□□□□ 0.76
CMTM3-204ENST00000562357 FGF18O76093 207 aa19.81■□□□□ 0.76
CMTM3-204ENST00000562357 SPATA31C1P0DKV0 1188 aa19.81■□□□□ 0.76
CMTM3-204ENST00000562357 RPA1P27694 616 aa19.81■□□□□ 0.76
CMTM3-204ENST00000562357 PUS10Q3MIT2 529 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms