RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 NPLOC4Q8TAT6 608 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 TRIB2Q92519 343 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
PCAT1-202ENST00000561978 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 DEF6Q9H4E7 631 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 FLRT1Q9NZU1 646 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 CEP72Q9P209 647 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 FBXO40Q9UH90 709 aa12.73□□□□□ -0.37
PCAT1-202ENST00000561978 SSU72P8A0A1W2PR75 194 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 LCA5LO95447 670 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 NR2F2P24468 414 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 GRK4P32298 578 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 VAV2P52735 878 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 PRMT2P55345 433 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 TMCO3Q6UWJ1 677 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 SFR1Q86XK3 245 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 TNS4Q8IZW8 715 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 ABRAQ8N0Z2 381 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 DYDC2Q96IM9 177 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 TYW1Q9NV66 732 aaKnown RBP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 MYO6Q9UM54 1294 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 NKRFO15226 690 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 ATP8B1O43520 1251 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 FAM13AO94988 1023 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 TUBBP07437 444 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 TRIM32Q13049 653 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 IRF5Q13568 498 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 CTTNQ14247 550 aaKnown RBP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 TKFCQ3LXA3 575 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 BAP1Q92560 729 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 APBA2Q99767 749 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 FGFBP2Q9BYJ0 223 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 CYP39A1Q9NYL5 469 aa12.72□□□□□ -0.37
PCAT1-202ENST00000561978 ARMCX3Q9UH62 379 aaPredicted RBP12.72□□□□□ -0.37
PCAT1-202ENST00000561978 LRRC53A6NM62 1247 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 SLC16A3O15427 465 aaKnown RBP12.71□□□□□ -0.37
PCAT1-202ENST00000561978 AKR1B10O60218 316 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 ABL1P00519 1130 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 BAATQ14032 418 aaPredicted RBP12.71□□□□□ -0.37
PCAT1-202ENST00000561978 TEX35Q5T0J7 233 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 SLC30A10Q6XR72 485 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 C1orf186Q6ZWK4 172 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 SMAP1Q8IYB5 467 aaPredicted RBP12.71□□□□□ -0.37
PCAT1-202ENST00000561978 RUSC1Q9BVN2 902 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 PARVGQ9HBI0 331 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 ODF2LQ9ULJ1 636 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 UBE4BO95155 1302 aa12.71□□□□□ -0.37
PCAT1-202ENST00000561978 LCTP09848 1927 aa12.71□□□□□ -0.38
PCAT1-202ENST00000561978 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.38
PCAT1-202ENST00000561978 ANO9A1A5B4 782 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CTAGE15A4D2H0 777 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CHMP2AO43633 222 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 GCNT3O95395 438 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CTAGE8P0CG41 777 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 EPB41P11171 864 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 XRCC5P13010 732 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 KIF11P52732 1056 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 NFIL3Q16649 462 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 B3GNT9Q6UX72 402 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CTAGE6Q86UF2 777 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CTAGE4Q8IX94 777 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 MYCT1Q8N699 235 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 MAML3Q96JK9 1138 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 IFIH1Q9BYX4 1025 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 RPTORQ8N122 1335 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 DNAJC25-GNG10A0A024R161 153 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 EPHB6O15197 1021 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 PRPF6O94906 941 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 AFPP02771 609 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 SERPING1P05155 500 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 HOXC6P09630 235 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 MYBP10242 640 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 ARP10275 920 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CYP2C19P33261 490 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 CASP5P51878 434 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 UBXN2AP68543 259 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 ZNF792Q3KQV3 632 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 PAPD7Q5XG87 772 aaKnown RBP12.7□□□□□ -0.38
PCAT1-202ENST00000561978 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 PXYLP1Q8TE99 480 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 PIGOQ8TEQ8 1089 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 RPGRIP1Q96KN7 1286 aa12.7□□□□□ -0.38
PCAT1-202ENST00000561978 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms