RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 RPAINQ86UA6 219 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 SLC9A9Q8IVB4 645 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 EFCAB13Q8IY85 973 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 GPR161Q8N6U8 529 aaKnown RBP11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 BSNDQ8WZ55 320 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 NHEJ1Q9H9Q4 299 aaPredicted RBP11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 GABBR1Q9UBS5 961 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 SAMM50Q9Y512 469 aa11.19□□□□□ -0.62
TUBGCP4-202ENST00000561691 LRRC53A6NM62 1247 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 LCA5LO95447 670 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 MAEAQ7L5Y9 396 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 CDHR1Q96JP9 859 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 PCYT2Q99447 389 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 CRACR2AQ9BSW2 395 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 MKNK1Q9BUB5 465 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 TIPINQ9BVW5 301 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 LSM14BQ9BX40 385 aaKnown RBP11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 LZTFL1Q9NQ48 299 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 SLC9A2Q9UBY0 812 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 TRIM10Q9UDY6 481 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 ARMCX3Q9UH62 379 aaPredicted RBP11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 AJAP1Q9UKB5 411 aaPredicted RBP11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 TFR2Q9UP52 801 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 ARID2Q68CP9 1835 aa11.18□□□□□ -0.62
TUBGCP4-202ENST00000561691 SUPT20HL2P0C7V6 817 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 MAP2K2P36507 400 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 STXBP2Q15833 593 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 SWSAP1Q6NVH7 229 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 C12orf56Q8IXR9 622 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 CCDC170Q8IYT3 715 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 ANKRD35Q8N283 1001 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 ZSWIM2Q8NEG5 633 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 OLIG1Q8TAK6 271 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 LACRTQ9GZZ8 138 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 GBP3Q9H0R5 595 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 ARFGAP3Q9NP61 516 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 PLCB1Q9NQ66 1216 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 CEP72Q9P209 647 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 PCDHB13Q9Y5F0 798 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 AFPP02771 609 aaKnown RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 ACTN1P12814 892 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 SLC9A1P19634 815 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 UBA1P22314 1058 aaKnown RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 PON1P27169 355 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 NF2P35240 595 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 SOX10P56693 466 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 GNG11P61952 73 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 PPP2R3AQ06190 1150 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 MYBPC2Q14324 1141 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 C1orf220Q5T0J3 134 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 RSRC2Q7L4I2 434 aaKnown RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 RRAGAQ7L523 313 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 SYN2Q92777 582 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 PCMTD1Q96MG8 357 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 NTPCRQ9BSD7 190 aaKnown RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 CARD6Q9BX69 1037 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 METTL14Q9HCE5 456 aaKnown RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 ADGRA3Q8IWK6 1321 aa11.17□□□□□ -0.62
TUBGCP4-202ENST00000561691 GSTTP1A0A1W2PQM5 241 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 K7ENM7 598 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 SORBS3O60504 671 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 PSAPP07602 524 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 RPL13P26373 211 aaKnown RBP11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 PRKCEQ02156 737 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 GNPTABQ3T906 1256 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 DNAJC21Q5F1R6 531 aaKnown RBP11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 XKR9Q5GH70 373 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 KLHDC7AQ5VTJ3 777 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 TADA2BQ86TJ2 420 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 NCAPG2Q86XI2 1143 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 FAM186BQ8IYM0 893 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 PLEKHO2Q8TD55 490 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 MORC4Q8TE76 937 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 MYH11P35749 1972 aa11.16□□□□□ -0.62
TUBGCP4-202ENST00000561691 A0A087WUV0 522 aaPredicted RBP11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 SLC16A4O15374 487 aa11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 ARIH2O95376 493 aa11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 SLC25A27O95847 323 aa11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 EPB41P11171 864 aaKnown RBP11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 ADSSP30520 456 aa11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 PSMC2P35998 433 aaKnown RBP11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 EIF4A3P38919 411 aaKnown RBP11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 NPTX2P47972 431 aa11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
TUBGCP4-202ENST00000561691 ALCAMQ13740 583 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms