RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SMRP1Q8NCR6 262 aa28.39■■■□□ 2.14
NME3-202ENST00000561637 P2RX5Q93086 422 aa28.39■■■□□ 2.14
NME3-202ENST00000561637 FGFR1P11362 822 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 NPEPPSP55786 919 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 ZXDAP98168 799 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 GUCY1B3Q02153 619 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 CCDC83Q8IWF9 413 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 DIS3L2Q8IYB7 885 aaKnown RBP28.38■■■□□ 2.13
NME3-202ENST00000561637 FAM20AQ96MK3 541 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 PCDHGC5Q9Y5F6 944 aa28.38■■■□□ 2.13
NME3-202ENST00000561637 FNDC1Q4ZHG4 1894 aaPredicted RBP28.38■■■□□ 2.13
NME3-202ENST00000561637 GLP2RO95838 553 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 TMOD1P28289 359 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 PSMC5P62195 406 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 SPIRE1Q08AE8 756 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 NCAPH2Q6IBW4 605 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 EFHBQ8N7U6 833 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 KLHL23Q8NBE8 558 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 SCLT1Q96NL6 688 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 RNF19AQ9NV58 838 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 RGL1Q9NZL6 768 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 PCDHB7Q9Y5E2 793 aa28.37■■■□□ 2.13
NME3-202ENST00000561637 IGKV6-21A0A0C4DH24 114 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 TBKBP1A7MCY6 615 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 DARSP14868 501 aaKnown RBP28.36■■■□□ 2.13
NME3-202ENST00000561637 EIF4BP23588 611 aaKnown RBP28.36■■■□□ 2.13
NME3-202ENST00000561637 NRIP1P48552 1158 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 COASYQ13057 564 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 SLC24A5Q71RS6 500 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 RBM23Q86U06 439 aaKnown RBP28.36■■■□□ 2.13
NME3-202ENST00000561637 KSR1Q8IVT5 923 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 NLRP7Q8WX94 980 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 C1orf112Q9NSG2 853 aa28.36■■■□□ 2.13
NME3-202ENST00000561637 BMP2KQ9NSY1 1161 aaPredicted RBP28.36■■■□□ 2.13
NME3-202ENST00000561637 BARX2Q9UMQ3 279 aaPredicted RBP28.36■■■□□ 2.13
NME3-202ENST00000561637 ZBTB39O15060 712 aa28.35■■■□□ 2.13
NME3-202ENST00000561637 FAM189BP81408 668 aa28.35■■■□□ 2.13
NME3-202ENST00000561637 CBX2Q14781 532 aaPredicted RBP28.35■■■□□ 2.13
NME3-202ENST00000561637 FBXL6Q8N531 539 aa28.35■■■□□ 2.13
NME3-202ENST00000561637 POF1BQ8WVV4 589 aa28.35■■■□□ 2.13
NME3-202ENST00000561637 FAM86C1Q9NVL1 165 aa28.35■■■□□ 2.13
NME3-202ENST00000561637 USP15Q9Y4E8 981 aaPredicted RBP28.35■■■□□ 2.13
NME3-202ENST00000561637 ST18O60284 1047 aa28.34■■■□□ 2.13
NME3-202ENST00000561637 MAFO75444 373 aaPredicted RBP28.34■■■□□ 2.13
NME3-202ENST00000561637 QARSP47897 775 aaKnown RBP28.34■■■□□ 2.13
NME3-202ENST00000561637 CTTNQ14247 550 aaKnown RBP28.34■■■□□ 2.13
NME3-202ENST00000561637 SUGP1Q8IWZ8 645 aaKnown RBP28.34■■■□□ 2.13
NME3-202ENST00000561637 DYDC2Q96IM9 177 aa28.34■■■□□ 2.13
NME3-202ENST00000561637 LXNQ9BS40 222 aa28.34■■■□□ 2.13
NME3-202ENST00000561637 BRMS1Q9HCU9 246 aa28.34■■■□□ 2.13
NME3-202ENST00000561637 LIMCH1Q9UPQ0 1083 aa28.34■■■□□ 2.13
NME3-202ENST00000561637 A0A087WZ62 844 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 TBX3O15119 743 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 MARCH6O60337 910 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 RBM10P98175 930 aaKnown RBP28.33■■■□□ 2.13
NME3-202ENST00000561637 CYP4A11Q02928 519 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 NAALADL2Q58DX5 795 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 ODR4Q5SWX8 454 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 PPP2R3CQ969Q6 453 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 FDXACB1Q9BRP7 624 aaPredicted RBP28.33■■■□□ 2.13
NME3-202ENST00000561637 CYP26B1Q9NR63 512 aa28.33■■■□□ 2.13
NME3-202ENST00000561637 SUCLA2Q9P2R7 463 aaPredicted RBP28.33■■■□□ 2.13
NME3-202ENST00000561637 VCPP55072 806 aaKnown RBP28.32■■■□□ 2.12
NME3-202ENST00000561637 EPHA7Q15375 998 aa28.32■■■□□ 2.12
NME3-202ENST00000561637 PRRX2Q99811 253 aa28.32■■■□□ 2.12
NME3-202ENST00000561637 TMEM161AQ9NX61 479 aa28.32■■■□□ 2.12
NME3-202ENST00000561637 P4HBP07237 508 aaKnown RBP28.31■■■□□ 2.12
NME3-202ENST00000561637 RHPN2Q8IUC4 686 aa28.31■■■□□ 2.12
NME3-202ENST00000561637 RNF169Q8NCN4 708 aa28.31■■■□□ 2.12
NME3-202ENST00000561637 RPGRIP1Q96KN7 1286 aa28.31■■■□□ 2.12
NME3-202ENST00000561637 NAP1L4Q99733 375 aaKnown RBP28.31■■■□□ 2.12
NME3-202ENST00000561637 TMEM60Q9H2L4 133 aa28.31■■■□□ 2.12
NME3-202ENST00000561637 ATP6V0A4Q9HBG4 840 aa28.31■■■□□ 2.12
NME3-202ENST00000561637 TYW1Q9NV66 732 aaKnown RBP28.31■■■□□ 2.12
NME3-202ENST00000561637 PLXNA3P51805 1871 aa28.31■■■□□ 2.12
NME3-202ENST00000561637 EIF5BO60841 1220 aaKnown RBP28.3■■■□□ 2.12
NME3-202ENST00000561637 ATF7P17544 494 aaPredicted RBP28.3■■■□□ 2.12
NME3-202ENST00000561637 ATP2B1P20020 1258 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 LRRC55Q6ZSA7 311 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 ECHDC2Q86YB7 292 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 TMEM143Q96AN5 459 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 CEP170P1Q96L14 293 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 PHF7Q9BWX1 381 aaPredicted RBP28.3■■■□□ 2.12
NME3-202ENST00000561637 CWH43Q9H720 699 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 CACNA1HO95180 2353 aa28.3■■■□□ 2.12
NME3-202ENST00000561637 PER2O15055 1255 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 SIGLEC14Q08ET2 396 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 TRIM29Q14134 588 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 CALCRLQ16602 461 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 CLLU1OSQ5K130 101 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 SPOUT1Q5T280 376 aaKnown RBP28.29■■■□□ 2.12
NME3-202ENST00000561637 ASIC4Q96FT7 647 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 NLRP4Q96MN2 994 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 CASD1Q96PB1 797 aa28.29■■■□□ 2.12
NME3-202ENST00000561637 GCOM2Q9BZD3 368 aaPredicted RBP28.29■■■□□ 2.12
NME3-202ENST00000561637 ZFHX2Q9C0A1 2572 aaPredicted RBP28.29■■■□□ 2.12
NME3-202ENST00000561637 MYO15AQ9UKN7 3530 aa28.28■■■□□ 2.12
NME3-202ENST00000561637 A0A087WWV3 80 aa28.28■■■□□ 2.12
NME3-202ENST00000561637 PBX3P40426 434 aa28.28■■■□□ 2.12
NME3-202ENST00000561637 VN1R2Q8NFZ6 395 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms