RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 IBSPP21815 317 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 CYP3A7P24462 503 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 CTNNB1P35222 781 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 MMP16P51512 607 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 PAK2Q13177 524 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 DRP2Q13474 957 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 NONOQ15233 471 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■■■■□ 21.8
ZEB1-223ENST00000561304 KIZQ2M2Z5 673 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 FAM228AQ86W67 206 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 CKAP2LQ8IYA6 745 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 LRRC71Q8N4P6 559 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 GTF3C6Q969F1 213 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 ZNF668Q96K58 619 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 CEP89Q96ST8 783 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 RIT2Q99578 217 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 SH2D3AQ9BRG2 576 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 TEKT3Q9BXF9 490 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 SQORQ9Y6N5 450 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 TDRD15B5MCY1 1934 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 C5orf67F2Z3F1 127 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 EML1O00423 815 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 GRM6O15303 877 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 JAK2O60674 1132 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 CSPG5O95196 566 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 RPLP2P05387 115 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 NFX1Q12986 1120 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 NR5A1Q13285 461 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 GPM6BQ13491 265 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 LETM2Q2VYF4 491 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 PAN2Q504Q3 1202 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 PIK3AP1Q6ZUJ8 805 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 NME8Q8N427 588 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 FIBCD1Q8N539 461 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 METTL13Q8N6R0 699 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 NSUN7Q8NE18 718 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 SYMPKQ92797 1274 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 CLP1Q92989 425 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 TNFRSF25Q93038 417 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 MRPL38Q96DV4 380 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 UHRF1Q96T88 793 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 KCNMB3Q9NPA1 279 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 LMCD1Q9NZU5 365 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 ORC3Q9UBD5 711 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 DDX25Q9UHL0 483 aaKnown RBP8.35□□□□□ -1.07
ZEB1-223ENST00000561304 TCEAL9Q9UHQ7 104 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 VAV3Q9UKW4 847 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 ST3GAL5Q9UNP4 418 aa8.35□□□□□ -1.07
ZEB1-223ENST00000561304 TNFRSF10AO00220 468 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 RPS6KA5O75582 802 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 CDKL5O76039 1030 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 FGFR4P22455 802 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 DNAJB1P25685 340 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 SFNP31947 248 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 SLC19A1P41440 591 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 JAK3P52333 1124 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 NLRP11P59045 1033 aaKnown RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 BTG3Q14201 252 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 DSC3Q14574 896 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 TARBP2Q15633 366 aaKnown RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 MTERF2Q49AM1 385 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 TCEAL5Q5H9L2 206 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 PLA2G4FQ68DD2 849 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 GALNT17Q6IS24 598 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 EFCAB12Q6NXP0 572 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 CPLX2Q6PUV4 134 aaKnown RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 MOXD1Q6UVY6 613 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 NPAS4Q8IUM7 802 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 FAM177A1Q8N128 213 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 HAS1Q92839 578 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 TNPO1Q92973 898 aaKnown RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 FAM167AQ96KS9 214 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 SAMD11Q96NU1 681 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 ADAM2Q99965 735 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 FTHL17Q9BXU8 183 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 ADAMTS10Q9H324 1103 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 UBE2ZQ9H832 354 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 PRDM9Q9NQV7 894 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 WRAP73Q9P2S5 460 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-223ENST00000561304 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 COG5Q9UP83 839 aa8.34□□□□□ -1.07
ZEB1-223ENST00000561304 WDFY4Q6ZS81 3184 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-223ENST00000561304 CCDC194A0A1B0GVG4 234 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 C9IYK1 514 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 SPTLC1O15269 473 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 CSDE1O75534 798 aaKnown RBP8.33□□□□□ -1.08
ZEB1-223ENST00000561304 DXOO77932 396 aaKnown RBP8.33□□□□□ -1.08
ZEB1-223ENST00000561304 NDUFV2P19404 249 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 GTF2F1P35269 517 aaKnown RBP eCLIP8.33□□□□□ -1.08
ZEB1-223ENST00000561304 BMPR1AP36894 532 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 SARSP49591 514 aaKnown RBP8.33□□□□□ -1.08
ZEB1-223ENST00000561304 GPC3P51654 580 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 NEK4P51957 841 aa8.33□□□□□ -1.08
ZEB1-223ENST00000561304 CRYBB1P53674 252 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms