RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CHST12Q9NRB3 414 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 PRMT7Q9NVM4 692 aaPredicted RBP11.84□□□□□ -0.51
TPM1-229ENST00000561242 ODF2LQ9ULJ1 636 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
TPM1-229ENST00000561242 ZBTB39O15060 712 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 HOXA2O43364 376 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 KINO60870 393 aaKnown RBP11.83□□□□□ -0.52
TPM1-229ENST00000561242 HIP1RO75146 1068 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 UPP2O95045 317 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 CHRNA1P02708 482 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 DARSP14868 501 aaKnown RBP11.83□□□□□ -0.52
TPM1-229ENST00000561242 ATP2A2P16615 1042 aaKnown RBP11.83□□□□□ -0.52
TPM1-229ENST00000561242 GAP43P17677 238 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 CD52P31358 61 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 GPC3P51654 580 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 PEX3P56589 373 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 POU5F1BQ06416 359 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 GRB10Q13322 594 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 RAB30Q15771 203 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 FBXO47Q5MNV8 452 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 SYCP3Q8IZU3 236 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 FSIP1Q8NA03 581 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 RNF169Q8NCN4 708 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 HERVK_113Q902F9 699 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 DHX38Q92620 1227 aaKnown RBP11.83□□□□□ -0.52
TPM1-229ENST00000561242 ZBTB10Q96DT7 871 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 SLC9A7Q96T83 725 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 YME1L1Q96TA2 773 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 PARVGQ9HBI0 331 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 PADI3Q9ULW8 664 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
TPM1-229ENST00000561242 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
TPM1-229ENST00000561242 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 TLL1O43897 1013 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 SMC2O95347 1197 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 GUCY2CP25092 1073 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 RAB27AP51159 221 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 ASIC1P78348 528 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 PRPF4BQ13523 1007 aaKnown RBP11.82□□□□□ -0.52
TPM1-229ENST00000561242 SHHQ15465 462 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 TMEM119Q4V9L6 283 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 HERC4Q5GLZ8 1057 aaPredicted RBP11.82□□□□□ -0.52
TPM1-229ENST00000561242 TMEM240Q5SV17 173 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
TPM1-229ENST00000561242 NOTUMQ6P988 496 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 DYMQ7RTS9 669 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 FAM178BQ8IXR5 827 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 GDF15Q99988 308 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.82□□□□□ -0.52
TPM1-229ENST00000561242 WNT8AQ9H1J5 351 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 TNMDQ9H2S6 317 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 MRPL44Q9H9J2 332 aaKnown RBP11.82□□□□□ -0.52
TPM1-229ENST00000561242 WRAP73Q9P2S5 460 aaPredicted RBP11.82□□□□□ -0.52
TPM1-229ENST00000561242 SEL1LQ9UBV2 794 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 LRRC37A2A6NM11 1700 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 UMODL1Q5DID0 1318 aa11.82□□□□□ -0.52
TPM1-229ENST00000561242 MCM3APO60318 1980 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 IGKV6-21A0A0C4DH24 114 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 A0A1B0GVL5 298 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 ZBTB42B2RXF5 422 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 NR1I2O75469 434 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 STBD1O95210 358 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 CXCL10P02778 98 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 MYL1P05976 194 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 PLS3P13797 630 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 PTMSP20962 102 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 ARL2P36404 184 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 HIC1Q14526 733 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
TPM1-229ENST00000561242 LPIN1Q14693 890 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
TPM1-229ENST00000561242 PLEKHG4Q58EX7 1191 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 RESP18Q5W5W9 173 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 SLC24A5Q71RS6 500 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 PNMA5Q96PV4 448 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 FAM193BQ96PV7 902 aaPredicted RBP11.81□□□□□ -0.52
TPM1-229ENST00000561242 ADAM2Q99965 735 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
TPM1-229ENST00000561242 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 UBN1Q9NPG3 1134 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 AAASQ9NRG9 546 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 PANK4Q9NVE7 773 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
TPM1-229ENST00000561242 ZDHHC9Q9Y397 364 aa11.81□□□□□ -0.52
TPM1-229ENST00000561242 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
TPM1-229ENST00000561242 KIAA0100Q14667 2235 aaKnown RBP11.8□□□□□ -0.52
TPM1-229ENST00000561242 CARNS1A5YM72 827 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 K7ENM7 598 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 N4BP3O15049 544 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 TRAK2O60296 914 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 NBNO60934 754 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 GPR32O75388 356 aa11.8□□□□□ -0.52
TPM1-229ENST00000561242 ITGB8P26012 769 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms