RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 GLRA2P23416 452 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 PTENP60484 403 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 MAPK7Q13164 816 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 TFDP1Q14186 410 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 E2F4Q16254 413 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 TCTN1Q2MV58 587 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 CLEC17AQ6ZS10 378 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 KSR1Q8IVT5 923 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 DAW1Q8N136 415 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 OSMRQ99650 979 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 FDXACB1Q9BRP7 624 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 PYM1Q9BRP8 204 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 FTHL17Q9BXU8 183 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 GCOM2Q9BZD3 368 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 MTIF3Q9H2K0 278 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 PADI3Q9ULW8 664 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 ST3GAL5Q9UNP4 418 aa10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 NOC2LQ9Y3T9 749 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 TDRD15B5MCY1 1934 aaKnown RBP10.68□□□□□ -0.7
RABGGTA-221ENST00000561055 MYO9BQ13459 2157 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 LAMA2P24043 3122 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 SZT2Q5T011 3432 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 NAMPTP43490 491 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 PAK2Q13177 524 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 CAPSQ13938 189 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 MCM6Q14566 821 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 DSC3Q14574 896 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 PPP2R5AQ15172 486 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 LRIT3Q3SXY7 679 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 CDCA2Q69YH5 1023 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 CNNM4Q6P4Q7 775 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 OTOP2Q7RTS6 562 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 RTN4RL1Q86UN2 441 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 FAM228AQ86W67 206 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 IQUBQ8NA54 791 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 RNF149Q8NC42 400 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 RASSF8Q8NHQ8 419 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 PHOSPHO2Q8TCD6 241 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 ASAP3Q8TDY4 903 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 NLRP7Q8WX94 980 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 DRC1Q96MC2 740 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 RUSC1Q9BVN2 902 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 TRAIPQ9BWF2 469 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 POLR3FQ9H1D9 316 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 GPRC5CQ9NQ84 441 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 KBTBD4Q9NVX7 518 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 FAM13BQ9NYF5 915 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 HPSEQ9Y251 543 aa10.67□□□□□ -0.7
RABGGTA-221ENST00000561055 KIAA1671Q9BY89 1806 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 ENPP3O14638 875 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 HIP1RO75146 1068 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 SRGAP2CP0DJJ0 459 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 SCP2P22307 547 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 CD52P31358 61 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 STAT6P42226 847 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 PHKA2P46019 1235 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 ZNF131P52739 623 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 WDR5P61964 334 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 GIT2Q14161 759 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 FAM187BQ17R55 369 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 BSNDQ8WZ55 320 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 RNPC3Q96LT9 517 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 NLRP4Q96MN2 994 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 SLC9A7Q96T83 725 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 LRRC27Q9C0I9 530 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 TNMDQ9H2S6 317 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 MAGEF1Q9HAY2 307 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 CHST12Q9NRB3 414 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 RGS18Q9NS28 235 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 CXXC1Q9P0U4 656 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 USP25Q9UHP3 1055 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 KCNH3Q9ULD8 1083 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 GINS2Q9Y248 185 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 COL4A6Q14031 1691 aa10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 PDCD11Q14690 1871 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-221ENST00000561055 PHLPP2Q6ZVD8 1323 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 POLR2DO15514 142 aaKnown RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 SSBP05455 408 aaKnown RBP eCLIP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 SFPQP23246 707 aaKnown RBP eCLIP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 AXLP30530 894 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 FAM189BP81408 668 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 HABP4Q5JVS0 413 aaKnown RBP10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 FAM102BQ5T8I3 360 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 MAEAQ7L5Y9 396 aa10.65□□□□□ -0.7
RABGGTA-221ENST00000561055 GPBP1Q86WP2 473 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms