RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CWF19L1Q69YN2 538 aaKnown RBP20.97■□□□□ 0.95
TPM1-226ENST00000560959 CCDC105Q8IYK2 499 aa20.97■□□□□ 0.95
TPM1-226ENST00000560959 IGSF21Q96ID5 467 aa20.97■□□□□ 0.95
TPM1-226ENST00000560959 LRRC2Q9BYS8 371 aa20.97■□□□□ 0.95
TPM1-226ENST00000560959 SEMA4AQ9H3S1 761 aa20.97■□□□□ 0.95
TPM1-226ENST00000560959 NT5C1B-RDH14C9J2C7 533 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 SKIP12755 728 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 EPCAMP16422 314 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 NPR3P17342 541 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 RTN1Q16799 776 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 GPR149Q86SP6 731 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 CABP7Q86V35 215 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 LRRC71Q8N4P6 559 aa20.96■□□□□ 0.95
TPM1-226ENST00000560959 ESYT2A0FGR8 921 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 ZBTB43O43298 467 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 CIITAP33076 1130 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 CA8P35219 290 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 RCAN1P53805 252 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 JAKMIP3Q5VZ66 844 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 TRMT1LQ7Z2T5 733 aaKnown RBP20.95■□□□□ 0.94
TPM1-226ENST00000560959 FLCNQ8NFG4 579 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 ZMYND12Q9H0C1 365 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 SFXN1Q9H9B4 322 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 DUSP12Q9UNI6 340 aa20.95■□□□□ 0.94
TPM1-226ENST00000560959 WDR64B1ANS9 1081 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 OATP04181 439 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 PHKA2P46019 1235 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 EXOSC10Q01780 885 aaKnown RBP20.94■□□□□ 0.94
TPM1-226ENST00000560959 KANK3Q6NY19 840 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 TMC5Q6UXY8 1006 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 C15orf39Q6ZRI6 1047 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 CCDC149Q6ZUS6 474 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 GCOM2Q9BZD3 368 aaPredicted RBP20.94■□□□□ 0.94
TPM1-226ENST00000560959 IGSF9Q9P2J2 1179 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 SAMM50Q9Y512 469 aa20.94■□□□□ 0.94
TPM1-226ENST00000560959 PI15O43692 258 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 ZNF862O60290 1169 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 ZNF623O75123 536 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 ZC3H11AO75152 810 aaKnown RBP eCLIP20.93■□□□□ 0.94
TPM1-226ENST00000560959 GALTP07902 379 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 ANGPT1Q15389 498 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 PFKFB3Q16875 520 aaPredicted RBP20.93■□□□□ 0.94
TPM1-226ENST00000560959 TMEM173Q86WV6 379 aaPredicted RBP20.93■□□□□ 0.94
TPM1-226ENST00000560959 DTWD2Q8NBA8 298 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 NLRP7Q8WX94 980 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 INO80BQ9C086 356 aaPredicted RBP20.93■□□□□ 0.94
TPM1-226ENST00000560959 NRDE2Q9H7Z3 1164 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 KCNK12Q9HB15 430 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 DISC1Q9NRI5 854 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 BRPF3Q9ULD4 1205 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 GVINP1Q7Z2Y8 2422 aa20.93■□□□□ 0.94
TPM1-226ENST00000560959 TBC1D8BQ0IIM8 1120 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 TARBP2Q15633 366 aaKnown RBP20.92■□□□□ 0.94
TPM1-226ENST00000560959 NOMO2Q5JPE7 1267 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 GLB1LQ6UWU2 654 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 CYP26C1Q6V0L0 522 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 CCDC12Q8WUD4 166 aaPredicted RBP20.92■□□□□ 0.94
TPM1-226ENST00000560959 AUTS2Q8WXX7 1259 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 SCLT1Q96NL6 688 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 EMILIN2Q9BXX0 1053 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 C6orf50Q9HD87 102 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 FAM217BQ9NTX9 383 aaPredicted RBP20.92■□□□□ 0.94
TPM1-226ENST00000560959 TBC1D13Q9NVG8 400 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 WNT16Q9UBV4 365 aa20.92■□□□□ 0.94
TPM1-226ENST00000560959 FGFR4P22455 802 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 SFNP31947 248 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 MYH9P35579 1960 aaKnown RBP20.91■□□□□ 0.94
TPM1-226ENST00000560959 PTPN14Q15678 1187 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 PRR16Q569H4 304 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 RNF20Q5VTR2 975 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 DHX32Q7L7V1 743 aaKnown RBP20.91■□□□□ 0.94
TPM1-226ENST00000560959 LENG9Q96B70 501 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 ZNF668Q96K58 619 aaPredicted RBP20.91■□□□□ 0.94
TPM1-226ENST00000560959 RIT2Q99578 217 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 RHOBTB2Q9BYZ6 727 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 FBXL21Q9UKT6 434 aa20.91■□□□□ 0.94
TPM1-226ENST00000560959 OFD1O75665 1012 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 SFPQP23246 707 aaKnown RBP eCLIP20.9■□□□□ 0.94
TPM1-226ENST00000560959 GNA11P29992 359 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 RAB27AP51159 221 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 CLCN4P51793 760 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 PRKCEQ02156 737 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 LETM2Q2VYF4 491 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 ZNF410Q86VK4 478 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 REXO1Q8N1G1 1221 aaKnown RBP20.9■□□□□ 0.94
TPM1-226ENST00000560959 CMASQ8NFW8 434 aaPredicted RBP20.9■□□□□ 0.94
TPM1-226ENST00000560959 KLHL5Q96PQ7 755 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 ESYT1Q9BSJ8 1104 aa20.9■□□□□ 0.94
TPM1-226ENST00000560959 NIFKQ9BYG3 293 aaKnown RBP20.9■□□□□ 0.94
TPM1-226ENST00000560959 IGKV6-21A0A0C4DH24 114 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 CCDC196A0A1B0GTZ2 297 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 GOLGA8AA7E2F4 631 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 GOLGA8BA8MQT2 603 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 LILRB3O75022 631 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 KLRC2P26717 231 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 DNM2P50570 870 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 JAK3P52333 1124 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 NONOQ15233 471 aaKnown RBP eCLIP20.89■□□□□ 0.93
TPM1-226ENST00000560959 TSGA10IPQ3SY00 556 aa20.89■□□□□ 0.93
TPM1-226ENST00000560959 TWF2Q6IBS0 349 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms