RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 CHST12Q9NRB3 414 aa22.34■■□□□ 1.17
IPO4-215ENST00000560935 TFF2Q03403 129 aa22.33■■□□□ 1.17
IPO4-215ENST00000560935 SPOUT1Q5T280 376 aaKnown RBP22.33■■□□□ 1.17
IPO4-215ENST00000560935 CATSPER4Q7RTX7 472 aa22.33■■□□□ 1.17
IPO4-215ENST00000560935 ECHDC2Q86YB7 292 aa22.33■■□□□ 1.17
IPO4-215ENST00000560935 ERMNQ8TAM6 284 aa22.33■■□□□ 1.17
IPO4-215ENST00000560935 PRPF31Q8WWY3 499 aaKnown RBP22.33■■□□□ 1.17
IPO4-215ENST00000560935 CUL9Q8IWT3 2517 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 GRM6O15303 877 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 ASAP2O43150 1006 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 FGFR1P11362 822 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 TECP42680 631 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 LAMTOR4Q0VGL1 99 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 ABI1Q8IZP0 508 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 TMEM117Q9H0C3 514 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 NSUN3Q9H649 340 aaKnown RBP22.32■■□□□ 1.16
IPO4-215ENST00000560935 TUFT1Q9NNX1 390 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 AAASQ9NRG9 546 aa22.32■■□□□ 1.16
IPO4-215ENST00000560935 PIN4Q9Y237 131 aaKnown RBP22.32■■□□□ 1.16
IPO4-215ENST00000560935 A0A0U1RQF3 1178 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 DGAT1O75907 488 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 SRGAP2CP0DJJ0 459 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 XRCC6P12956 609 aaKnown RBP eCLIP22.31■■□□□ 1.16
IPO4-215ENST00000560935 GJB2P29033 226 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 SRGAP1Q7Z6B7 1085 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 FERMT3Q86UX7 667 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 RNF169Q8NCN4 708 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 IFT122Q9HBG6 1241 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 PLAGL2Q9UPG8 496 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 PCDHB12Q9Y5F1 795 aa22.31■■□□□ 1.16
IPO4-215ENST00000560935 ATG2AQ2TAZ0 1938 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 EOMESO95936 686 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 RARRES1P49788 294 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 MXD4Q14582 209 aaPredicted RBP22.3■■□□□ 1.16
IPO4-215ENST00000560935 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 TWF2Q6IBS0 349 aaKnown RBP22.3■■□□□ 1.16
IPO4-215ENST00000560935 PIGOQ8TEQ8 1089 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 POLR3CQ9BUI4 534 aaPredicted RBP22.3■■□□□ 1.16
IPO4-215ENST00000560935 UBE2ZQ9H832 354 aaPredicted RBP22.3■■□□□ 1.16
IPO4-215ENST00000560935 ALG13Q9NP73 1137 aaKnown RBP22.3■■□□□ 1.16
IPO4-215ENST00000560935 XPNPEP1Q9NQW7 623 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 REV3LO60673 3130 aa22.3■■□□□ 1.16
IPO4-215ENST00000560935 H3BQV1 296 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 SPATA31C1P0DKV0 1188 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 SKIP12755 728 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 PHKA2P46019 1235 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 NBR1Q14596 966 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 TCEAL5Q5H9L2 206 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 HAUS3Q68CZ6 603 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 CATSPER3Q86XQ3 398 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 LRRC43Q8N309 656 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 KLHL23Q8NBE8 558 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 RNF149Q8NC42 400 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 TRAIPQ9BWF2 469 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 RNF19AQ9NV58 838 aa22.29■■□□□ 1.16
IPO4-215ENST00000560935 TYW1Q9NV66 732 aaKnown RBP22.29■■□□□ 1.16
IPO4-215ENST00000560935 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.29■■□□□ 1.16
IPO4-215ENST00000560935 MED24O75448 989 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 ITGB1P05556 798 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 LAG3P18627 525 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 RPA1P27694 616 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 FXR2P51116 673 aaKnown RBP eCLIP22.28■■□□□ 1.164e-6■■■■□ 23.1
IPO4-215ENST00000560935 RAB27AP51159 221 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 KCNQ1P51787 676 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 TFDP1Q14186 410 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 CSPP1Q1MSJ5 1256 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 ZNF598Q86UK7 904 aaKnown RBP22.28■■□□□ 1.16
IPO4-215ENST00000560935 ADAMTS19Q8TE59 1207 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 CASD1Q96PB1 797 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 NACC1Q96RE7 527 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 AGPAT5Q9NUQ2 364 aa22.28■■□□□ 1.16
IPO4-215ENST00000560935 USO1O60763 962 aaKnown RBP22.27■■□□□ 1.16
IPO4-215ENST00000560935 CSPG5O95196 566 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 TOB1P50616 345 aaPredicted RBP22.27■■□□□ 1.16
IPO4-215ENST00000560935 PTGDRQ13258 359 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 C4orf32Q8N8J7 132 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 COLGALT1Q8NBJ5 622 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 SPPL3Q8TCT6 385 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 RAB34Q9BZG1 259 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 CWH43Q9H720 699 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 BRWD1Q9NSI6 2320 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 HCSTQ9UBK5 93 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 DBR1Q9UK59 544 aaKnown RBP22.27■■□□□ 1.16
IPO4-215ENST00000560935 PCDHB6Q9Y5E3 794 aa22.27■■□□□ 1.16
IPO4-215ENST00000560935 PLXNA4Q9HCM2 1894 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 A0A087WWV3 80 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.26■■□□□ 1.15
IPO4-215ENST00000560935 LAD1O00515 517 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 BMP1P13497 986 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 ATF7P17544 494 aaPredicted RBP22.26■■□□□ 1.15
IPO4-215ENST00000560935 MUTP22033 750 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 PCBP1Q15365 356 aaKnown RBP eCLIP22.26■■□□□ 1.15
IPO4-215ENST00000560935 RILPL1Q5EBL4 403 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 CLLU1OSQ5K130 101 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 POTEGQ6S5H5 508 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 THNSL1Q8IYQ7 743 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 HELQQ8TDG4 1101 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 POF1BQ8WVV4 589 aa22.26■■□□□ 1.15
IPO4-215ENST00000560935 RSPH1Q8WYR4 309 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms