RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 WDR72Q3MJ13 1102 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 ATP13A4Q4VNC1 1196 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 SLFN12LQ6IEE8 588 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 RALYLQ86SE5 291 aaKnown RBP6.23□□□□□ -1.41
PSMA4-221ENST00000560842 RASSF3Q86WH2 238 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 RTF1Q92541 710 aaKnown RBP6.23□□□□□ -1.41
PSMA4-221ENST00000560842 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
PSMA4-221ENST00000560842 SLC5A5Q92911 643 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 EXTL1Q92935 676 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 ZNF496Q96IT1 587 aaPredicted RBP6.23□□□□□ -1.41
PSMA4-221ENST00000560842 PITHD1Q9GZP4 211 aaPredicted RBP6.23□□□□□ -1.41
PSMA4-221ENST00000560842 CSRNP2Q9H175 543 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 PHLDB1Q86UU1 1377 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 A0A0G2JNJ9 132 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.22□□□□□ -1.41
PSMA4-221ENST00000560842 GPR39O43194 453 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 ULK1O75385 1050 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 CPEP16870 476 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 BCAR1P56945 870 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 STAT4Q14765 748 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 LSM12Q3MHD2 195 aaKnown RBP6.22□□□□□ -1.41
PSMA4-221ENST00000560842 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 BROXQ5VW32 411 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 GRAMD4Q6IC98 578 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 FAM177A1Q8N128 213 aaPredicted RBP6.22□□□□□ -1.41
PSMA4-221ENST00000560842 TUBGCP5Q96RT8 1024 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 CARD11Q9BXL7 1154 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 BRINP2Q9C0B6 783 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 Q9UFV3 132 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 DENND2AQ9ULE3 1009 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 SHROOM4Q9ULL8 1493 aa6.22□□□□□ -1.41
PSMA4-221ENST00000560842 ELL2O00472 640 aaPredicted RBP6.21□□□□□ -1.42
PSMA4-221ENST00000560842 PRPF6O94906 941 aaKnown RBP6.21□□□□□ -1.42
PSMA4-221ENST00000560842 INHBCP55103 352 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 SESN3P58005 492 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 DDB1Q16531 1140 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 CT47A1Q5JQC4 288 aaPredicted RBP6.21□□□□□ -1.42
PSMA4-221ENST00000560842 KIAA1841Q6NSI8 718 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 TIGD7Q6NT04 549 aaPredicted RBP6.21□□□□□ -1.42
PSMA4-221ENST00000560842 FRMD7Q6ZUT3 714 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 BMP8AQ7Z5Y6 402 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 C7orf31Q8N865 590 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 GIMAP8Q8ND71 665 aaPredicted RBP6.21□□□□□ -1.42
PSMA4-221ENST00000560842 WDR48Q8TAF3 677 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 KCMF1Q9P0J7 381 aa6.21□□□□□ -1.42
PSMA4-221ENST00000560842 A0A087X1B8 175 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 K7ESF4 209 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 COMTP21964 271 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 CNGA1P29973 690 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 DGCR2P98153 550 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 AMPD3Q01432 767 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 ADCY2Q08462 1091 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 MAP3K12Q12852 859 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 USP10Q14694 798 aaKnown RBP6.2□□□□□ -1.42
PSMA4-221ENST00000560842 NOLC1Q14978 699 aaKnown RBP eCLIP6.2□□□□□ -1.42
PSMA4-221ENST00000560842 RNF219Q5W0B1 726 aaPredicted RBP6.2□□□□□ -1.42
PSMA4-221ENST00000560842 LHFPL2Q6ZUX7 228 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 TAX1BP1Q86VP1 789 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 IFNL2Q8IZJ0 200 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 LRRC37BQ96QE4 947 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 MYL10Q9BUA6 226 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 WNT8AQ9H1J5 351 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 POFUT1Q9H488 388 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 MSRAQ9UJ68 235 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 VWA7Q9Y334 891 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
PSMA4-221ENST00000560842 ADCY8P40145 1251 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 ANTXR2P58335 489 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 FAPQ12884 760 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 ZBTB41Q5SVQ8 909 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 PRAMEF9Q5VWM5 478 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 ESPNLQ6ZVH7 1005 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 LARP4Q71RC2 724 aaKnown RBP eCLIP6.19□□□□□ -1.42
PSMA4-221ENST00000560842 CXorf67Q86X51 503 aaPredicted RBP6.19□□□□□ -1.42
PSMA4-221ENST00000560842 DDX42Q86XP3 938 aaKnown RBP eCLIP6.19□□□□□ -1.42
PSMA4-221ENST00000560842 DNAJC10Q8IXB1 793 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 OR5AN1Q8NGI8 311 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 RPGRQ92834 1020 aaKnown RBP6.19□□□□□ -1.42
PSMA4-221ENST00000560842 NKD2Q969F2 451 aaPredicted RBP6.19□□□□□ -1.42
PSMA4-221ENST00000560842 MS4A5Q9H3V2 200 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 TMPRSS11EQ9UL52 423 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 ATP8A1Q9Y2Q0 1164 aa6.19□□□□□ -1.42
PSMA4-221ENST00000560842 OPHN1O60890 802 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 ZNF888P0CJ79 500 aaPredicted RBP6.18□□□□□ -1.42
PSMA4-221ENST00000560842 HNRNPA0Q13151 305 aaKnown RBP6.18□□□□□ -1.42
PSMA4-221ENST00000560842 NFYCQ13952 458 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 DGKDQ16760 1214 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 Q6ZSN1 163 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 OTOP2Q7RTS6 562 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 SPATS2Q86XZ4 545 aaKnown RBP6.18□□□□□ -1.42
PSMA4-221ENST00000560842 FUKQ8N0W3 1084 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 PPP1R14CQ8TAE6 165 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 WDR66Q8TBY9 1149 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 NUMBLQ9Y6R0 609 aa6.18□□□□□ -1.42
PSMA4-221ENST00000560842 PCSK5Q92824 1860 aa6.17□□□□□ -1.42
PSMA4-221ENST00000560842 LCHNA4D1U4 455 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms