RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 FAM192AQ9GZU8 254 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 KLHL14Q9P2G3 628 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 hCG_1984214I3L0E3 225 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 HNRNPCL1O60812 293 aaKnown RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 FAM26FQ5R3K3 315 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 ZNF713Q8N859 430 aaPredicted RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 FAM167BQ9BTA0 163 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 VCXQ9H320 206 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 SIX2Q9NPC8 291 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
PBX1-219ENST00000560641 TRAF3IP3Q9Y228 551 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 STARD13Q9Y3M8 1113 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 CD2APQ9Y5K6 639 aa17.32■□□□□ 0.36
PBX1-219ENST00000560641 SPDYE5A6NIY4 337 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 PON1P27169 355 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 ECHDC2Q86YB7 292 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
PBX1-219ENST00000560641 C12orf50Q8NA57 414 aaPredicted RBP17.31■□□□□ 0.36
PBX1-219ENST00000560641 GLIS3Q8NEA6 775 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 FBXO41Q8TF61 875 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 AZIN2Q96A70 460 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
PBX1-219ENST00000560641 C2CD2Q9Y426 696 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 PSMC4P43686 418 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
PBX1-219ENST00000560641 PLTPP55058 493 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 TMEM266Q2M3C6 531 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 GPIHBP1Q8IV16 184 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 NCSTNQ92542 709 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 C6orf50Q9HD87 102 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 IL17RBQ9NRM6 502 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 STK38LQ9Y2H1 464 aa17.31■□□□□ 0.36
PBX1-219ENST00000560641 TMEM120BA0PK00 339 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 MPHOSPH10O00566 681 aaKnown RBP17.3■□□□□ 0.36
PBX1-219ENST00000560641 STARD3NLO95772 234 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 TUBP50607 506 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 SLC18A1P54219 525 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 OCRLQ01968 901 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 LAMB3Q13751 1172 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 EPHA7Q15375 998 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 EZH1Q92800 747 aaPredicted RBP17.3■□□□□ 0.36
PBX1-219ENST00000560641 KIFAP3Q92845 792 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 BORCS6Q96GS4 357 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 ZNF333Q96JL9 665 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 TIPINQ9BVW5 301 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 MIF4GDA9UHW6 222 aaKnown RBP17.3■□□□□ 0.36
PBX1-219ENST00000560641 TTLL1O95922 423 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 SNX1Q13596 522 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 PPP1R15BQ5SWA1 713 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 C11orf63Q6NUN7 778 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 LRCH1Q9Y2L9 728 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 LMNB1P20700 586 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 IFNAR2P48551 515 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 POLGP54098 1239 aaPredicted RBP17.3■□□□□ 0.36
PBX1-219ENST00000560641 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
PBX1-219ENST00000560641 DYMQ7RTS9 669 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 FAM13CQ8NE31 585 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 ETNK1Q9HBU6 452 aa17.3■□□□□ 0.36
PBX1-219ENST00000560641 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 RAD23BP54727 409 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 PPARDQ03181 441 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 ARHGAP22Q7Z5H3 698 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 DNAJC9Q8WXX5 260 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 DCLRE1BQ9H816 532 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 SH3BP1Q9Y3L3 701 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 NAV1Q8NEY1 1877 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 PFASO15067 1338 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 DDX60LQ5H9U9 1706 aaKnown RBP17.29■□□□□ 0.36
PBX1-219ENST00000560641 TLDC2A0PJX2 215 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 GALCP54803 685 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 HEATR3Q7Z4Q2 680 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 SCFD1Q8WVM8 642 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 PPP1R9AQ9ULJ8 1098 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 ZMYND8Q9ULU4 1186 aaPredicted RBP17.29■□□□□ 0.36
PBX1-219ENST00000560641 SNX24Q9Y343 169 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
PBX1-219ENST00000560641 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 GM2AP17900 193 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 ARID5AQ03989 594 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 CUL3Q13618 768 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 CALCRLQ16602 461 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 FAM47AQ5JRC9 791 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 LMOD2Q6P5Q4 547 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 ARHGEF2Q92974 986 aaKnown RBP17.28■□□□□ 0.36
PBX1-219ENST00000560641 CDK5RAP3Q96JB5 506 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 GOPCQ9HD26 462 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 TRIM33Q9UPN9 1127 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
PBX1-219ENST00000560641 SLC16A3O15427 465 aaKnown RBP17.28■□□□□ 0.36
PBX1-219ENST00000560641 PTDSS1P48651 473 aaKnown RBP17.28■□□□□ 0.36
PBX1-219ENST00000560641 RRP1BQ14684 758 aaKnown RBP17.28■□□□□ 0.36
PBX1-219ENST00000560641 LRRC41Q15345 812 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms