RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 LRRC45Q96CN5 670 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 OSBPL9Q96SU4 736 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CHP1Q99653 195 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 MYD88Q99836 296 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 EDEM3Q9BZQ6 932 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 CSRNP2Q9H175 543 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 IGFLR1Q9H665 355 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 SH2D4AQ9H788 454 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 MAGEF1Q9HAY2 307 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 LY9Q9HBG7 655 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 TAB2Q9NYJ8 693 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 HDAC6Q9UBN7 1215 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 BCORQ6W2J9 1755 aa6.53□□□□□ -1.36
SNRPA1-209ENST00000560307 UBR2Q8IWV8 1755 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ERICH2A1L162 156 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 EYA2O00167 538 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ENC1O14682 589 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TLR3O15455 904 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 AHCYL1O43865 530 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ATP6V1G2O95670 118 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TFRCP02786 760 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 PARP1P09874 1014 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 H2AFB1P0C5Y9 115 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 H2AFB2P0C5Z0 115 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 FAM157BP0CG42 384 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 MYBP10242 640 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ALADP13716 330 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CCT6AP40227 531 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 GRIA4P48058 902 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TRAPPC10P48553 1259 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 KCNQ4P56696 695 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TNNC1P63316 161 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 UBXN1Q04323 297 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TRAF1Q13077 416 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 IFT88Q13099 833 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CAMK2GQ13555 558 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CUL1Q13616 776 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 SEPT2Q15019 361 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TCEAL1Q15170 157 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 PDCD2Q16342 344 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CDC37Q16543 378 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CFAP221Q4G0U5 840 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 RRAGBQ5VZM2 374 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 EGFLAMQ63HQ2 1017 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 KLHL10Q6JEL2 608 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 LRP10Q7Z4F1 713 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CROCCP2Q86T23 111 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 FAM228AQ86W67 206 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TEX9Q8N6V9 391 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 RASSF8Q8NHQ8 419 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CFAP61Q8NHU2 1237 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 IGDCC4Q8TDY8 1250 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 NELFBQ8WX92 580 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CUL5Q93034 780 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 RRP36Q96EU6 259 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CAPZA3Q96KX2 299 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 RHOVQ96L33 236 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 CCDC43Q96MW1 224 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ERGIC2Q96RQ1 377 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 LRRC1Q9BTT6 524 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 NT5C1AQ9BXI3 368 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC26A6Q9BXS9 759 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 RNF26Q9BY78 433 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 KRT23Q9C075 422 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 VPS16Q9H269 839 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TAF1DQ9H5J8 278 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 NHEJ1Q9H9Q4 299 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ZFYVE1Q9HBF4 777 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 LUC7LQ9NQ29 371 aaKnown RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 GJB4Q9NTQ9 266 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 EXOC1Q9NV70 894 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ETAA1Q9NY74 926 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 MAGEC2Q9UBF1 373 aaPredicted RBP6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 TRIM10Q9UDY6 481 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 SLC12A6Q9UHW9 1150 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 PCDHGC4Q9Y5F7 938 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 RTL9Q8NET4 1388 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 ATAD5Q96QE3 1844 aa6.52□□□□□ -1.37
SNRPA1-209ENST00000560307 PAPPAQ13219 1627 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 MYH1P12882 1939 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 A0A0G2JLW4 131 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 SSU72P8A0A1W2PR75 194 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 BICDL2A1A5D9 508 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 ZNF233A6NK53 670 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 BTBD18B2RXH4 712 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 E7EVH7 732 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 ASAP2O43150 1006 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 GPAA1O43292 621 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 PPIP5K2O43314 1243 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 ORC4O43929 436 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 SRGAP2O75044 1071 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 SNUPNO95149 360 aaKnown RBP6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 FESP07332 822 aa6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 MAPTP10636 758 aaKnown RBP6.51□□□□□ -1.37
SNRPA1-209ENST00000560307 PAX7P23759 505 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms