RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 GAP43P17677 238 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 ITGB8P26012 769 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 DMP1Q13316 513 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 LPIN1Q14693 890 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 SPECC1Q5M775 1068 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 CNNM4Q6P4Q7 775 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 APBB1IPQ7Z5R6 666 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 GPBP1Q86WP2 473 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 TDHQ8IZJ6 230 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 PHOSPHO2Q8TCD6 241 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 SPIRE2Q8WWL2 714 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 HERVK_113Q902F9 699 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 KCNN1Q92952 543 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 TMEM143Q96AN5 459 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 SH2D3AQ9BRG2 576 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 POLR3FQ9H1D9 316 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 HOOK1Q9UJC3 728 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-215ENST00000560207 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 NBNO60934 754 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 TBCAO75347 108 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 ZSCAN20P17040 1043 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 SYKP43405 635 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 KCNJ6P48051 423 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 PTENP60484 403 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 TMEM62Q0P6H9 643 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 KCNK18Q7Z418 384 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 DEFB128Q7Z7B8 93 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 RNF149Q8NC42 400 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 DEPTORQ8TB45 409 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 CCDC51Q96ER9 411 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 PLIN2Q99541 437 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 PARVGQ9HBI0 331 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 C1orf112Q9NSG2 853 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 PRMT7Q9NVM4 692 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 KBTBD4Q9NVX7 518 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 PADI3Q9ULW8 664 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 GINS2Q9Y248 185 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 HPSEQ9Y251 543 aa13.33□□□□□ -0.28
RABGGTA-215ENST00000560207 TTC3P53804 2025 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 A0A087WZ62 844 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 HIP1RO75146 1068 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 ERLIN2O94905 339 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 FAM13AO94988 1023 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 SRGAP2CP0DJJ0 459 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 PLS3P13797 630 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 GLRA2P23416 452 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 ALCAMQ13740 583 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 MCM6Q14566 821 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 MBTPS1Q14703 1052 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 E2F4Q16254 413 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 FAM187BQ17R55 369 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 CDCA2Q69YH5 1023 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 PDILTQ8N807 584 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 DBF4BQ8NFT6 615 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 OSMRQ99650 979 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 FDXACB1Q9BRP7 624 aaPredicted RBP13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 TRAIPQ9BWF2 469 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 GTPBP4Q9BZE4 634 aaKnown RBP13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 PRO3102Q9H379 93 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 TMEM134Q9H6X4 195 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 IFT122Q9HBG6 1241 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
RABGGTA-215ENST00000560207 LRRIQ4A6NIV6 560 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 AMHP03971 560 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 GHRP10912 638 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 PFKFB1P16118 471 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 RAB27AP51159 221 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 ZNF131P52739 623 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 UBE2HP62256 183 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 NFX1Q12986 1120 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 DRP2Q13474 957 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 CAPSQ13938 189 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 MAPK6Q16659 721 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 CATSPER4Q7RTX7 472 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 CCDC65Q8IXS2 484 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 ELOA2Q8IYF1 753 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 FSIP1Q8NA03 581 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 CCDC47Q96A33 483 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 DHX58Q96C10 678 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 HVCN1Q96D96 273 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 ZBTB10Q96DT7 871 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
RABGGTA-215ENST00000560207 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.288e-7■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms