RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GAS2O43903 313 aaKnown RBP14.07□□□□□ -0.16
SNX1-209ENST00000559961 DNAJB1P25685 340 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 GTF2F1P35269 517 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNX1-209ENST00000559961 IRS1P35568 1242 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 ZP2Q05996 745 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 EPHA7Q15375 998 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 URGCPQ8TCY9 931 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 PSPC1Q8WXF1 523 aaKnown RBP14.07□□□□□ -0.16
SNX1-209ENST00000559961 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 CASD1Q96PB1 797 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
SNX1-209ENST00000559961 TCF25Q9BQ70 676 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 FDXACB1Q9BRP7 624 aaPredicted RBP14.07□□□□□ -0.16
SNX1-209ENST00000559961 ZSWIM4Q9H7M6 989 aa14.07□□□□□ -0.16
SNX1-209ENST00000559961 PRR33A8MZF0 331 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 PER2O15055 1255 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 LINC01565O15544 149 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 SLC37A4O43826 429 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 FGFR4P22455 802 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 NEK4P51957 841 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 AK2P54819 239 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 DLX2Q07687 328 aaPredicted RBP14.06□□□□□ -0.16
SNX1-209ENST00000559961 COASYQ13057 564 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 CAMK1Q14012 370 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 SMC1AQ14683 1233 aaKnown RBP14.06□□□□□ -0.16
SNX1-209ENST00000559961 XKR9Q5GH70 373 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 PLPP4Q5VZY2 271 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 ADGRD2Q7Z7M1 963 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 TPH2Q8IWU9 490 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 HELQQ8TDG4 1101 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 SH2D3AQ9BRG2 576 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 CWH43Q9H720 699 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 CD320Q9NPF0 282 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 STK39Q9UEW8 545 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 PCDHA12Q9UN75 941 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 ARIH1Q9Y4X5 557 aaPredicted RBP14.06□□□□□ -0.16
SNX1-209ENST00000559961 COL4A3BPQ9Y5P4 624 aa14.06□□□□□ -0.16
SNX1-209ENST00000559961 IGKV6-21A0A0C4DH24 114 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 FAM86C2PA6NEL3 165 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 EDIL3O43854 480 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 TBX10O75333 385 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
SNX1-209ENST00000559961 ERLIN2O94905 339 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 EYA4O95677 639 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 SRGAP2CP0DJJ0 459 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 YWHABP31946 246 aaKnown RBP14.05□□□□□ -0.16
SNX1-209ENST00000559961 PHKA2P46019 1235 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 GNL2Q13823 731 aaKnown RBP14.05□□□□□ -0.16
SNX1-209ENST00000559961 TFDP1Q14186 410 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 CALCRLQ16602 461 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 PLA2G4FQ68DD2 849 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 B3GNT9Q6UX72 402 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 ANO5Q75V66 913 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 C4orf19Q8IY42 314 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 LXNQ9BS40 222 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 KANSL3Q9P2N6 904 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 TRANK1O15050 2925 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 RALGAPA2Q2PPJ7 1873 aa14.05□□□□□ -0.16
SNX1-209ENST00000559961 SPTBN5Q9NRC6 3674 aaKnown RBP14.04□□□□□ -0.16
SNX1-209ENST00000559961 TMEM150BA6NC51 233 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 EML1O00423 815 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 CENPBP07199 599 aaPredicted RBP14.04□□□□□ -0.16
SNX1-209ENST00000559961 HOXB8P17481 243 aaPredicted RBP14.04□□□□□ -0.16
SNX1-209ENST00000559961 TECP42680 631 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 ERVFC1P60507 584 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 GIT2Q14161 759 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 MXD4Q14582 209 aaPredicted RBP14.04□□□□□ -0.16
SNX1-209ENST00000559961 NPY5RQ15761 445 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 DUSP6Q16828 381 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 CES5AQ6NT32 575 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 HACE1Q8IYU2 909 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 NECAB1Q8N987 351 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
SNX1-209ENST00000559961 CASP10Q92851 521 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 MTRQ99707 1265 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 FAM105AQ9NUU6 356 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 BARX2Q9UMQ3 279 aaPredicted RBP14.04□□□□□ -0.16
SNX1-209ENST00000559961 INPP5FQ9Y2H2 1132 aa14.04□□□□□ -0.16
SNX1-209ENST00000559961 ZC3H11AO75152 810 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX1-209ENST00000559961 NR1I2O75469 434 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 CXCL14O95715 111 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 PLA2G5P39877 138 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 NPEPPSP55786 919 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 BCAR1P56945 870 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 DRP2Q13474 957 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 PCBP1Q15365 356 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX1-209ENST00000559961 NOMO2Q5JPE7 1267 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 CLLU1OSQ5K130 101 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 LLGL2Q6P1M3 1020 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 SMRP1Q8NCR6 262 aa14.03□□□□□ -0.16
SNX1-209ENST00000559961 CNNM3Q8NE01 707 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms