RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 NTRK3Q16288 839 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 Q4G0T1 1027 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 CLLU1OSQ5K130 101 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 IER5LQ5T953 404 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 ZNF598Q86UK7 904 aaKnown RBP10.32□□□□□ -0.76
HDDC3-204ENST00000559834 HELQQ8TDG4 1101 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 ZNF668Q96K58 619 aaPredicted RBP10.32□□□□□ -0.76
HDDC3-204ENST00000559834 RIPOR3Q96MK2 946 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 JPH2Q9BR39 696 aaPredicted RBP10.32□□□□□ -0.76
HDDC3-204ENST00000559834 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 APOL5Q9BWW9 433 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 AGXT2Q9BYV1 514 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 VPS54Q9P1Q0 977 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 SNX14Q9Y5W7 946 aa10.32□□□□□ -0.76
HDDC3-204ENST00000559834 NID2Q14112 1375 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 CPLX1O14810 134 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PSMD10O75832 226 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 FGFR4P22455 802 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PBX3P40426 434 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 MTHFRP42898 656 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PHKA2P46019 1235 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 POLGP54098 1239 aaPredicted RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 EVCP57679 992 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 MTERF2Q49AM1 385 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 ATAT1Q5SQI0 421 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 TWF2Q6IBS0 349 aaKnown RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 GALNT17Q6IS24 598 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 CPLX2Q6PUV4 134 aaKnown RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 GLB1LQ6UWU2 654 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 ZNF410Q86VK4 478 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 UBALD2Q8IYN6 164 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 FAM177A1Q8N128 213 aaPredicted RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 VPS52Q8N1B4 723 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PRSS33Q8NF86 280 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PGBD4Q96DM1 585 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 ASIC4Q96FT7 647 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 UNC45AQ9H3U1 944 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 TSHZ2Q9NRE2 1034 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 SUCLA2Q9P2R7 463 aaPredicted RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 STK39Q9UEW8 545 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PCDHA4Q9UN74 947 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 HCFC2Q9Y5Z7 792 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 PLXNA4Q9HCM2 1894 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 ZNF318Q5VUA4 2279 aa10.31□□□□□ -0.76
HDDC3-204ENST00000559834 KIAA1671Q9BY89 1806 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 CYP3A7-CYP3A51PA0A087WV96 503 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 A0A087WZ62 844 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 IGKV6-21A0A0C4DH24 114 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 NT5C1B-RDH14C9J2C7 533 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 EDIL3O43854 480 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 DKC1O60832 514 aaKnown RBP eCLIP10.3□□□□□ -0.76
HDDC3-204ENST00000559834 CLASP2O75122 1294 aaKnown RBP10.3□□□□□ -0.76
HDDC3-204ENST00000559834 ZNF623O75123 536 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 CSDE1O75534 798 aaKnown RBP10.3□□□□□ -0.76
HDDC3-204ENST00000559834 CYP3A7P24462 503 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 RAB27AP51159 221 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 PSMC5P62195 406 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 RNASELQ05823 741 aaKnown RBP10.3□□□□□ -0.76
HDDC3-204ENST00000559834 MTMR3Q13615 1198 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 UGCGQ16739 394 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 MOXD1Q6UVY6 613 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 DDX53Q86TM3 631 aaKnown RBP10.3□□□□□ -0.76
HDDC3-204ENST00000559834 PPFIBP1Q86W92 1011 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 RHPN2Q8IUC4 686 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 FDXACB1Q9BRP7 624 aaPredicted RBP10.3□□□□□ -0.76
HDDC3-204ENST00000559834 DZANK1Q9NVP4 752 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 SORCS3Q9UPU3 1222 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 IRAK3Q9Y616 596 aa10.3□□□□□ -0.76
HDDC3-204ENST00000559834 ST18O60284 1047 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 ZC3H11AO75152 810 aaKnown RBP eCLIP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 DEXIO95424 95 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 CTSAP10619 480 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 SP100P23497 879 aaPredicted RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 TCF15Q12870 199 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 DRP2Q13474 957 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 NONOQ15233 471 aaKnown RBP eCLIP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 NOMO2Q5JPE7 1267 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 RUFY3Q7L099 469 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 CATSPER4Q7RTX7 472 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 BLIDQ8IZY5 108 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 KREMEN2Q8NCW0 462 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 ATOH1Q92858 354 aaPredicted RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 GJA10Q969M2 543 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 ZNF274Q96GC6 653 aaPredicted RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 IGSF21Q96ID5 467 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 NCOA5Q9HCD5 579 aaKnown RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 FAM105AQ9NUU6 356 aa10.29□□□□□ -0.76
HDDC3-204ENST00000559834 DBR1Q9UK59 544 aaKnown RBP10.29□□□□□ -0.76
HDDC3-204ENST00000559834 PIN4Q9Y237 131 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms