RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 MYOCDQ8IZQ8 938 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 PRPF31Q8WWY3 499 aaKnown RBP11.51□□□□□ -0.57
TPM1-221ENST00000559831 NLRP4Q96MN2 994 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 SCLT1Q96NL6 688 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 NAT10Q9H0A0 1025 aaKnown RBP11.51□□□□□ -0.57
TPM1-221ENST00000559831 C17orf75Q9HAS0 396 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 OLFML3Q9NRN5 406 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 GRIN2DO15399 1336 aa11.51□□□□□ -0.57
TPM1-221ENST00000559831 MBLAC1A4D2B0 266 aaPredicted RBP11.5□□□□□ -0.57
TPM1-221ENST00000559831 VTNP04004 478 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 SRGAP2CP0DJJ0 459 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 MAPTP10636 758 aaKnown RBP11.5□□□□□ -0.57
TPM1-221ENST00000559831 NCKAP1LP55160 1127 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 STX17P56962 302 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 TMEM62Q0P6H9 643 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 CAPSQ13938 189 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 TFDP1Q14186 410 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 MXD4Q14582 209 aaPredicted RBP11.5□□□□□ -0.57
TPM1-221ENST00000559831 PTGISQ16647 500 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
TPM1-221ENST00000559831 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 SESTD1Q86VW0 696 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 GAS2L3Q86XJ1 694 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 ADSSL1Q8N142 457 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 LINC01465Q8N7H1 131 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 RNF149Q8NC42 400 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 RNF214Q8ND24 703 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 DEPTORQ8TB45 409 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 DNAJB3Q8WWF6 145 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 SPIRE2Q8WWL2 714 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 NELFBQ8WX92 580 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 FIZ1Q96SL8 496 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 NOD1Q9Y239 953 aa11.5□□□□□ -0.57
TPM1-221ENST00000559831 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 DENND3A2RUS2 1198 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 H0YCG3 227 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 PSMA7O14818 248 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 ASAP2O43150 1006 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 KIF20AO95235 890 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 HOXC8P31273 242 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 PPP1R2P41236 205 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 NAMPTP43490 491 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 ZNF165P49910 485 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 ADAM17P78536 824 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 PAK1Q13153 545 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 HAUS6Q7Z4H7 955 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 ZBTB8OSQ8IWT0 167 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 KIAA0319LQ8IZA0 1049 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 GUF1Q8N442 669 aaKnown RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 AOPEPQ8N6M6 819 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 SLC17A8Q8NDX2 589 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 DHTKD1Q96HY7 919 aaPredicted RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 SENP6Q9GZR1 1112 aaPredicted RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 CBX8Q9HC52 389 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 TRMT13Q9NUP7 481 aaKnown RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 PCDHB13Q9Y5F0 798 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 UBE4BO95155 1302 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
TPM1-221ENST00000559831 KIAA0100Q14667 2235 aaKnown RBP11.49□□□□□ -0.57
TPM1-221ENST00000559831 HTTP42858 3142 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 BECN2A8MW95 431 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 ARVCFO00192 962 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 EIF3DO15371 548 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPM1-221ENST00000559831 PHKA2P46019 1235 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 GJA8P48165 433 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 GPC3P51654 580 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
TPM1-221ENST00000559831 NLRP11P59045 1033 aaKnown RBP11.48□□□□□ -0.57
TPM1-221ENST00000559831 KCNA1Q09470 495 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 ALCAMQ13740 583 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 TPD52L1Q16890 204 aaPredicted RBP11.48□□□□□ -0.57
TPM1-221ENST00000559831 COBLL1Q53SF7 1204 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 TAF2Q6P1X5 1199 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 SYCP3Q8IZU3 236 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 ZNF507Q8TCN5 953 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 FAM200AQ8TCP9 573 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 DIS3LQ8TF46 1054 aaKnown RBP11.48□□□□□ -0.57
TPM1-221ENST00000559831 P2RX5Q93086 422 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 ACCSQ96QU6 501 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 TSG101Q99816 390 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 RBSNQ9H1K0 784 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 GINS2Q9Y248 185 aa11.48□□□□□ -0.57
TPM1-221ENST00000559831 PHLPP2Q6ZVD8 1323 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 A0A087WZ62 844 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 PPP1R37O75864 691 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 CAVIN2O95810 425 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 CTSHP09668 335 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 CCNE1P24864 410 aa11.47□□□□□ -0.57
TPM1-221ENST00000559831 ERCC5P28715 1186 aaPredicted RBP11.47□□□□□ -0.57
TPM1-221ENST00000559831 MNX1P50219 401 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms