RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 SLC44A3Q8N4M1 653 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 METTL13Q8N6R0 699 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 BCL7CQ8WUZ0 217 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 JADE2Q9NQC1 790 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 ARHGEF3Q9NR81 526 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 DLGAP2Q9P1A6 1054 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 IGSF9Q9P2J2 1179 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 PCDHB15Q9Y5E8 787 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 UBIAD1Q9Y5Z9 338 aa10.22□□□□□ -0.77
SNRPA1-208ENST00000559686 BAHCC1Q9P281 2608 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 PATJQ8NI35 1801 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 ACACBO00763 2458 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 C2CD2LO14523 706 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 ADRB1P08588 477 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 CTSAP10619 480 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 SRFP11831 508 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 CLCN3P51790 818 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 CSTF1Q05048 431 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 NONOQ15233 471 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 PPM1JQ5JR12 505 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 PLPPR4Q7Z2D5 763 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 CKAP2LQ8IYA6 745 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 PJA1Q8NG27 643 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 MYADMQ96S97 322 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 SDF4Q9BRK5 362 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 SMG5Q9UPR3 1016 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 INPP5FQ9Y2H2 1132 aa10.21□□□□□ -0.77
SNRPA1-208ENST00000559686 OTOGLQ3ZCN5 2332 aa10.21□□□□□ -0.78
SNRPA1-208ENST00000559686 CHD6Q8TD26 2715 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 CCDC195A0A1B0GUA6 201 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 hCG_1642624A0A1W2PR95 340 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 LAMTOR5O43504 91 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 HBP1O60381 514 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 GPR32O75388 356 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 SDSP20132 328 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 LMNB2Q03252 620 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 LPAL2Q16609 132 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 PDXDC2PQ6P474 469 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 TSSK4Q6SA08 328 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 GET4Q7L5D6 327 aaPredicted RBP10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 LPPQ93052 612 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 SECISBP2LQ93073 1101 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 RRP36Q96EU6 259 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 PGBD1Q96JS3 809 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 SCLT1Q96NL6 688 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 KLHL5Q96PQ7 755 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 RTKNQ9BST9 563 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 MYL10Q9BUA6 226 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 MAN1C1Q9NR34 630 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 KCNH7Q9NS40 1196 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 SEC63Q9UGP8 760 aaKnown RBP10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 USP24Q9UPU5 2620 aa10.2□□□□□ -0.78
SNRPA1-208ENST00000559686 TPRP12270 2363 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 CLUHO75153 1309 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 SPDYE3A6NKU9 549 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PRR5-ARHGAP8B1AHC4 643 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 CSDE1O75534 798 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 RFPL2O75678 378 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 CNPP09543 421 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 SPATA31D3P0C874 917 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 CLCN4P51793 760 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 ARHGAP8P85298 464 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 RNASELQ05823 741 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 SPEM2Q0P670 501 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 ITGB3BPQ13352 177 aaPredicted RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 UBXN2BQ14CS0 331 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 WTAPQ15007 396 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 FAM160B1Q5W0V3 765 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PHLDB3Q6NSJ2 640 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 SPATA31D4Q6ZUB0 917 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 DDX53Q86TM3 631 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PPFIBP1Q86W92 1011 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 CCDC60Q8IWA6 550 aaPredicted RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 CMTR1Q8N1G2 835 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 LRRC71Q8N4P6 559 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 IGSF21Q96ID5 467 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 EMILIN2Q9BXX0 1053 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 MRPL9Q9BYD2 267 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PSTPIP2Q9H939 334 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PARD6AQ9NPB6 346 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 DIAPH3Q9NSV4 1193 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 DNAJB4Q9UDY4 337 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PCDHA6Q9UN73 950 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 PCDHA8Q9Y5H6 950 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 MYH15Q9Y2K3 1946 aa10.19□□□□□ -0.78
SNRPA1-208ENST00000559686 SPTBN2O15020 2390 aa10.18□□□□□ -0.78
SNRPA1-208ENST00000559686 COL1A2P08123 1366 aa10.18□□□□□ -0.78
SNRPA1-208ENST00000559686 ERICH2A1L162 156 aa10.18□□□□□ -0.78
SNRPA1-208ENST00000559686 ZBTB42B2RXF5 422 aa10.18□□□□□ -0.78
SNRPA1-208ENST00000559686 SPTLC1O15269 473 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms