RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LRCH3Q96II8 777 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 NLRP4Q96MN2 994 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 KIFC3Q9BVG8 833 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
SNX1-204ENST00000559061 ST3GAL5Q9UNP4 418 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 DNM3Q9UQ16 869 aa12.71□□□□□ -0.37
SNX1-204ENST00000559061 FNDC1Q4ZHG4 1894 aaPredicted RBP12.7□□□□□ -0.38
SNX1-204ENST00000559061 TTLL13PA6NNM8 815 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 HIP1RO75146 1068 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 BAIAP3O94812 1187 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 EIF4BP23588 611 aaKnown RBP12.7□□□□□ -0.38
SNX1-204ENST00000559061 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 TMOD1P28289 359 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 FXR1P51114 621 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNX1-204ENST00000559061 PTENP60484 403 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 KRT85P78386 507 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 MBTD1Q05BQ5 628 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
SNX1-204ENST00000559061 ZNF410Q86VK4 478 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 RNF149Q8NC42 400 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 NLRP7Q8WX94 980 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 SEPT8Q92599 483 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
SNX1-204ENST00000559061 CCDC113Q9H0I3 377 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 NT5C3AQ9H0P0 336 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 GOLPH3LQ9H4A5 285 aa12.7□□□□□ -0.38
SNX1-204ENST00000559061 YBX2Q9Y2T7 364 aaKnown RBP12.7□□□□□ -0.38
SNX1-204ENST00000559061 FAM237AA0A1B0GTK4 181 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 ABHD14A-ACY1A0A1B0GW23 586 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 M0QZ92 97 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 ENPP3O14638 875 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 RPS6KA5O75582 802 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 SRGAP2CP0DJJ0 459 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 MYOGP15173 224 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 HOXA11P31270 313 aaPredicted RBP12.69□□□□□ -0.38
SNX1-204ENST00000559061 RABGGTBP53611 331 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 RAD51AP2Q09MP3 1159 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 PAK2Q13177 524 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 FAM102BQ5T8I3 360 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 TAS1R3Q7RTX0 852 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 KCTD17Q8N5Z5 321 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 USP38Q8NB14 1042 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 TCP11Q8WWU5 503 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 FIZ1Q96SL8 496 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
SNX1-204ENST00000559061 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
SNX1-204ENST00000559061 RNF19AQ9NV58 838 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 CFAP45Q9UL16 551 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 HPSEQ9Y251 543 aa12.69□□□□□ -0.38
SNX1-204ENST00000559061 LCHNA4D1U4 455 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 MYMKA6NI61 221 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 C9IYK1 514 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 B4GALT5O43286 388 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
SNX1-204ENST00000559061 NCLP19338 710 aaKnown RBP12.68□□□□□ -0.38
SNX1-204ENST00000559061 ME1P48163 572 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 DNM2P50570 870 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 GIT2Q14161 759 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 UBXN11Q5T124 520 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 GPBP1Q86WP2 473 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 PDILTQ8N807 584 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 LARP4BQ92615 738 aaKnown RBP12.68□□□□□ -0.38
SNX1-204ENST00000559061 APBB2Q92870 758 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 DNAJC19Q96DA6 116 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 CALML4Q96GE6 196 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 PBX4Q9BYU1 374 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 STK17AQ9UEE5 414 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 ATG2AQ2TAZ0 1938 aa12.68□□□□□ -0.38
SNX1-204ENST00000559061 COL4A4P53420 1690 aaPredicted RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 ZBBXA8MT70 800 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 TSPAN1O60635 241 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 SSBP05455 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX1-204ENST00000559061 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 ACTN1P12814 892 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 PFKFB1P16118 471 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 ATP2A2P16615 1042 aaKnown RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 NPTX2P47972 431 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 ZNF131P52739 623 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 POU5F1BQ06416 359 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 NFX1Q12986 1120 aaKnown RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 IKBKEQ14164 716 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 DHX8Q14562 1220 aaKnown RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 MXD4Q14582 209 aaPredicted RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 HERC6Q8IVU3 1022 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 EXOC8Q8IYI6 725 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 STAMQ92783 540 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
SNX1-204ENST00000559061 CCDC43Q96MW1 224 aaKnown RBP12.67□□□□□ -0.38
SNX1-204ENST00000559061 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms