RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ERMNQ8TAM6 284 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 SNX29Q8TEQ0 813 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 CSRNP2Q9H175 543 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 ALG13Q9NP73 1137 aaKnown RBP17.31■□□□□ 0.36
LINC01220-201ENST00000558575 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 FAM86C1Q9NVL1 165 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 MYO15AQ9UKN7 3530 aa17.31■□□□□ 0.36
LINC01220-201ENST00000558575 KAT6AQ92794 2004 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 GFRA3O60609 400 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 NBNO60934 754 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 MAFO75444 373 aaPredicted RBP17.3■□□□□ 0.36
LINC01220-201ENST00000558575 CHRNA1P02708 482 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 SELPP16109 830 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 DRP2Q13474 957 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 STK38Q15208 465 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 XKR9Q5GH70 373 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
LINC01220-201ENST00000558575 TCEAL5Q5H9L2 206 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 FAM26DQ5JW98 314 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 SPECC1Q5M775 1068 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 CNKSR3Q6P9H4 555 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 KCNK18Q7Z418 384 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 PABPC5Q96DU9 382 aaKnown RBP17.3■□□□□ 0.36
LINC01220-201ENST00000558575 CEP170P1Q96L14 293 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 RAB34Q9BZG1 259 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
LINC01220-201ENST00000558575 RCOR1Q9UKL0 485 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 KIAA1024Q9UPX6 916 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 DCHS1Q96JQ0 3298 aa17.3■□□□□ 0.36
LINC01220-201ENST00000558575 SPTLC2O15270 562 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 MAGEB2O15479 319 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 YEATS4O95619 227 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 CXCL10P02778 98 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 MUTP22033 750 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 LONP1P36776 959 aaKnown RBP17.29■□□□□ 0.36
LINC01220-201ENST00000558575 RARRES1P49788 294 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 NUCB2P80303 420 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 MGAT3Q09327 533 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 HYIQ5T013 277 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 KRT79Q5XKE5 535 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 EFCAB12Q6NXP0 572 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 EP400NLQ6ZTU2 488 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 LRRC8DQ7L1W4 858 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 LRRC71Q8N4P6 559 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 AK8Q96MA6 479 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 NACC1Q96RE7 527 aa17.29■□□□□ 0.36
LINC01220-201ENST00000558575 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
LINC01220-201ENST00000558575 WDR87Q6ZQQ6 2873 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 GVINP1Q7Z2Y8 2422 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 PPP6R2O75170 966 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 CTSHP09668 335 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 LTBRP36941 435 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 CLCN3P51790 818 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 TMEM62Q0P6H9 643 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 TIGD5Q53EQ6 642 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 AXDND1Q5T1B0 1012 aaPredicted RBP17.28■□□□□ 0.36
LINC01220-201ENST00000558575 HAUS3Q68CZ6 603 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 BMP8AQ7Z5Y6 402 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 RNF135Q8IUD6 432 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 METTL13Q8N6R0 699 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
LINC01220-201ENST00000558575 PLIN2Q99541 437 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 CDHR5Q9HBB8 845 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 XPNPEP1Q9NQW7 623 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 DDX19AQ9NUU7 478 aaKnown RBP17.28■□□□□ 0.36
LINC01220-201ENST00000558575 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
LINC01220-201ENST00000558575 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
LINC01220-201ENST00000558575 CACNA1BQ00975 2339 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 KIAA1671Q9BY89 1806 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 E9PMD0 336 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 CAND2O75155 1236 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 TMEM119Q4V9L6 283 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 CABP7Q86V35 215 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 NME8Q8N427 588 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 CCDC155Q8N6L0 562 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 EDAQ92838 391 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 CCSER1Q9C0I3 900 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 CFAP45Q9UL16 551 aa17.27■□□□□ 0.36
LINC01220-201ENST00000558575 ABHD14A-ACY1A0A1B0GW23 586 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 VTNP04004 478 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 UBA7P41226 1012 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 ZRSR1Q15695 479 aaKnown RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 SMAD2Q15796 467 aaKnown RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 CLUL1Q15846 466 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 SP7Q8TDD2 431 aaPredicted RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 LEO1Q8WVC0 666 aaPredicted RBP17.26■□□□□ 0.35
LINC01220-201ENST00000558575 ADAMTS10Q9H324 1103 aa17.26■□□□□ 0.35
LINC01220-201ENST00000558575 BMP2KQ9NSY1 1161 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms