RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 KCNJ15Q99712 375 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 SARS2Q9NP81 518 aaKnown RBP1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 GPRC5CQ9NQ84 441 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 TM7SF3Q9NS93 570 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 AP5S1Q9NUS5 200 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 ERVK13-1Q9NX77 482 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 DTLQ9NZJ0 730 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 MARCH2Q9P0N8 246 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 SLAMF8Q9P0V8 285 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 BTBD7Q9P203 1132 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 TRAF6Q9Y4K3 522 aa1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.66□□□□□ -2.14
CTDSPL2-202ENST00000558373 ARID1BQ8NFD5 2236 aaPredicted RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 SZT2Q5T011 3432 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 A0A0A6YYJ9 748 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 CCDC196A0A1B0GTZ2 297 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 KDM1AO60341 852 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 PPFIA4O75335 1185 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 FOSP01100 380 aaPredicted RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 MTHFD1P11586 935 aaKnown RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 ITGB5P18084 799 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 GRIA2P42262 883 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 ALDH6A1Q02252 535 aaKnown RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 TUSC3Q13454 348 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 TMEM132BQ14DG7 1078 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 POLD3Q15054 466 aaPredicted RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 MUM1Q2TAK8 710 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 USP45Q70EL2 814 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 TAS1R1Q7RTX1 841 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 UBE3DQ7Z6J8 389 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 NLRX1Q86UT6 975 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 CPNE8Q86YQ8 564 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 CERS3Q8IU89 383 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 TMEM151BQ8IW70 566 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 DRC7Q8IY82 874 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 COLGALT2Q8IYK4 626 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 KRT78Q8N1N4 520 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 NXPE1Q8N323 547 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 FBXL6Q8N531 539 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 PAF1Q8N7H5 531 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 UBR7Q8N806 425 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 NLGN4YQ8NFZ3 816 aaPredicted RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 PLEKHO2Q8TD55 490 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 GJA10Q969M2 543 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 MVB12AQ96EY5 273 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 TBATAQ96M53 351 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 ELF4Q99607 663 aaPredicted RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 CARS2Q9HA77 564 aaKnown RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 STARD7Q9NQZ5 370 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 DDX21Q9NR30 783 aaKnown RBP eCLIP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 DLL4Q9NR61 685 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 ZNF277Q9NRM2 450 aaPredicted RBP1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 SPTLC3Q9NUV7 552 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 RIC8BQ9NVN3 520 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 ZSCAN32Q9NX65 697 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 GALNT8Q9NY28 637 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 MOCS1Q9NZB8 636 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 MSRAQ9UJ68 235 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 TMPRSS11EQ9UL52 423 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 U3KQE9 123 aa1.65□□□□□ -2.14
CTDSPL2-202ENST00000558373 MYPNQ86TC9 1320 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PMS2P1A4D2B8 440 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PRAMEF25A6NGN4 478 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 RFXAPO00287 272 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 TUSC2O75896 110 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 CHEK2O96017 543 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 ESR1P03372 595 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 LTA4HP09960 611 aaKnown RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 IFNGR1P15260 489 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PRKCAP17252 672 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 JUNBP17275 347 aaPredicted RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 SP100P23497 879 aaPredicted RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 CLNS1AP54105 237 aaKnown RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 JAM2P57087 298 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 SURF1Q15526 300 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 NKPD1Q17RQ9 610 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 TMEM63BQ5T3F8 832 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 SLFN12LQ6IEE8 588 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 LILRA6Q6PI73 481 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 ZC3H14Q6PJT7 736 aaKnown RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 GADL1Q6ZQY3 521 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 KANSL1Q7Z3B3 1105 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PLEKHH3Q7Z736 793 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 OSTM1Q86WC4 334 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 CCDC150Q8NCX0 1101 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 FLAD1Q8NFF5 587 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 SNRNP27Q8WVK2 155 aaKnown RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PPP1R16BQ96T49 567 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 CHMP4AQ9BY43 222 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 KIAA1586Q9HCI6 787 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 NEU2Q9Y3R4 380 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 LOC400499M0QZD8 3231 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 MTSS1O43312 755 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PAX4O43316 350 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 SEMA7AO75326 666 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 GLI4P10075 376 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 HSD3B1P14060 373 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PDE6AP16499 860 aa1.65□□□□□ -2.15
CTDSPL2-202ENST00000558373 PTGS1P23219 599 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms