RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SUCLA2Q9P2R7 463 aaPredicted RBP13.68□□□□□ -0.22
TPM1-209ENST00000558072 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 SCN10AQ9Y5Y9 1956 aa13.68□□□□□ -0.22
TPM1-209ENST00000558072 ALPK3Q96L96 1907 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 NPHP3-ACAD11A0A0J9YXS1 232 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 CCDC169A6NNP5 214 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 M0QZ92 97 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 CAND2O75155 1236 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 GCNT3O95395 438 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 CASP1P29466 404 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 HOXC8P31273 242 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 GJA8P48165 433 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 ZNF165P49910 485 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 ATN1P54259 1190 aaPredicted RBP13.67□□□□□ -0.22
TPM1-209ENST00000558072 PEX3P56589 373 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 LRRC63Q05C16 580 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
TPM1-209ENST00000558072 STRN3Q13033 797 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 NBPF20Q3BBV1 942 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
TPM1-209ENST00000558072 MAEAQ7L5Y9 396 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 ZNF720Q7Z2F6 126 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 SFR1Q86XK3 245 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 CCDC155Q8N6L0 562 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 NOC3LQ8WTT2 800 aaKnown RBP13.67□□□□□ -0.22
TPM1-209ENST00000558072 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
TPM1-209ENST00000558072 ACCSQ96QU6 501 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 SLC39A2Q9NP94 309 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
TPM1-209ENST00000558072 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 K7ENM7 598 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 IKBKBO14920 756 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
TPM1-209ENST00000558072 CYP2C9P11712 490 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
TPM1-209ENST00000558072 PHKA2P46019 1235 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 NCKAP1LP55160 1127 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 ADAM17P78536 824 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
TPM1-209ENST00000558072 STK4Q13043 487 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 PAK1Q13153 545 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 MAPK7Q13164 816 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
TPM1-209ENST00000558072 BMT2Q1RMZ1 405 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 ANO6Q4KMQ2 910 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 FAM47CQ5HY64 1035 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 DAW1Q8N136 415 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 ADSSL1Q8N142 457 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 RWDD2AQ9UIY3 292 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 AKT3Q9Y243 479 aa13.66□□□□□ -0.22
TPM1-209ENST00000558072 LRRIQ4A6NIV6 560 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 K7ERI5 159 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 ARVCFO00192 962 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 KIAA0391O15091 583 aaKnown RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 TLR3O15455 904 aaKnown RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 CCNE1P24864 410 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 PRCPP42785 496 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 NPTX2P47972 431 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 GTF2BQ00403 316 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 PTK7Q13308 1070 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 MYBPC2Q14324 1141 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 KNOP1Q1ED39 458 aaKnown RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 UVSSAQ2YD98 709 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 DPCR1Q3MIW9 517 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 APBB1IPQ7Z5R6 666 aaPredicted RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 SRGAP1Q7Z6B7 1085 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 FAM114A1Q8IWE2 563 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 LINC01465Q8N7H1 131 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 ENOX1Q8TC92 643 aaKnown RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 PRPF31Q8WWY3 499 aaKnown RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 PPP1R16BQ96T49 567 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 SENP6Q9GZR1 1112 aaPredicted RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 TRIP12Q14669 1992 aaPredicted RBP13.65□□□□□ -0.22
TPM1-209ENST00000558072 BRCA2P51587 3418 aa13.65□□□□□ -0.22
TPM1-209ENST00000558072 SFI1A8K8P3 1242 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
TPM1-209ENST00000558072 PDXKO00764 312 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms