RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 SCLT1Q96NL6 688 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 C11orf84Q9BUA3 381 aaPredicted RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 PLVAPQ9BX97 442 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 NIFKQ9BYG3 293 aaKnown RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 INO80BQ9C086 356 aaPredicted RBP12.8□□□□□ -0.36
LINC00648-204ENST00000557749 GINS2Q9Y248 185 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 MTCH2Q9Y6C9 303 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
LINC00648-204ENST00000557749 SIP14410 1827 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 LCHNA4D1U4 455 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 ZBTB42B2RXF5 422 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 DLL1O00548 723 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 ADAMTS3O15072 1205 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 DXOO77932 396 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 P4HBP07237 508 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 ATP4AP20648 1035 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 TMEM62Q0P6H9 643 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 NFX1Q12986 1120 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 GRB10Q13322 594 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 TCTN1Q2MV58 587 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 PLA2G2CQ5R387 149 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 EFCAB12Q6NXP0 572 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 SLC24A5Q71RS6 500 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 CMTR2Q8IYT2 770 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 SLC7A3Q8WY07 619 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 C8orf76Q96K31 380 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 LMAN2LQ9H0V9 348 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
LINC00648-204ENST00000557749 PCDHB7Q9Y5E2 793 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 PTPRSQ13332 1948 aa12.79□□□□□ -0.36
LINC00648-204ENST00000557749 TTC3P53804 2025 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 NCK2O43639 380 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 SLC37A4O43826 429 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 NEMFO60524 1076 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 ZSCAN20P17040 1043 aaPredicted RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 RFC5P40937 340 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 SARSP49591 514 aaKnown RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 BTG3Q14201 252 aaPredicted RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 EPHA7Q15375 998 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 CALCRLQ16602 461 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 C8orf34Q49A92 452 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 KRT40Q6A162 431 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 ZNF410Q86VK4 478 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 MICALL1Q8N3F8 863 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 PPP2R3CQ969Q6 453 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 CCDC43Q96MW1 224 aaKnown RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 GCOM2Q9BZD3 368 aaPredicted RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 FOXP1Q9H334 677 aaPredicted RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 ELAC1Q9H777 363 aaKnown RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 ZSWIM4Q9H7M6 989 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
LINC00648-204ENST00000557749 CERS4Q9HA82 394 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 SUGCTQ9HAC7 445 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 AAASQ9NRG9 546 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 PCDHA12Q9UN75 941 aa12.78□□□□□ -0.36
LINC00648-204ENST00000557749 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 C5orf67F2Z3F1 127 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 H3BNC9 293 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 EDIL3O43854 480 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 ZNF862O60290 1169 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 DGKIO75912 1065 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 SKIP12755 728 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 EIF4BP23588 611 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TRAPPC10P48553 1259 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 KIZQ2M2Z5 673 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 EPC2Q52LR7 807 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TMCO2Q7Z6W1 182 aaPredicted RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 C4orf19Q8IY42 314 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TMEM192Q8IY95 271 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TCP11Q8WWU5 503 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 CLP1Q92989 425 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 MRPL38Q96DV4 380 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 UIMC1Q96RL1 719 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 OSMRQ99650 979 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 RGS18Q9NS28 235 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 VAV3Q9UKW4 847 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 MTUS1Q9ULD2 1270 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
LINC00648-204ENST00000557749 ST3GAL5Q9UNP4 418 aa12.77□□□□□ -0.37
LINC00648-204ENST00000557749 FSD2A1L4K1 749 aa12.76□□□□□ -0.37
LINC00648-204ENST00000557749 JAK2O60674 1132 aa12.76□□□□□ -0.37
LINC00648-204ENST00000557749 GPR32O75388 356 aa12.76□□□□□ -0.37
LINC00648-204ENST00000557749 MAFO75444 373 aaPredicted RBP12.76□□□□□ -0.37
LINC00648-204ENST00000557749 LARGE1O95461 756 aa12.76□□□□□ -0.37
LINC00648-204ENST00000557749 VTNP04004 478 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms