RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PRO3102Q9H379 93 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 GDPD2Q9HCC8 539 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 DDX19AQ9NUU7 478 aaKnown RBP10.06□□□□□ -0.8
CHD8-214ENST00000557727 TMEM39AQ9NV64 488 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 CFAP45Q9UL16 551 aa10.06□□□□□ -0.8
CHD8-214ENST00000557727 ZMYND8Q9ULU4 1186 aaPredicted RBP10.06□□□□□ -0.8
CHD8-214ENST00000557727 FAM237AA0A1B0GTK4 181 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 MAGEB2O15479 319 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD8-214ENST00000557727 NBNO60934 754 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 GPR32O75388 356 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 EYA4O95677 639 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 GNAT1P11488 350 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 PLCG1P19174 1290 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 EPHB4P54760 987 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 SLC12A3P55017 1021 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 TCTN1Q2MV58 587 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 RESP18Q5W5W9 173 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 TAF2Q6P1X5 1199 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 CLEC17AQ6ZS10 378 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 C16orf59Q7L2K0 433 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 CEP170P1Q96L14 293 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 NACC1Q96RE7 527 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 PLIN2Q99541 437 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 SPSB2Q99619 263 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 PPP1R12CQ9BZL4 782 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 BHMT2Q9H2M3 363 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 PRDM5Q9NQX1 630 aaPredicted RBP10.05□□□□□ -0.8
CHD8-214ENST00000557727 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 TTC3P53804 2025 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 KDM3AQ9Y4C1 1321 aa10.05□□□□□ -0.8
CHD8-214ENST00000557727 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
CHD8-214ENST00000557727 COL4A6Q14031 1691 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 CAND2O75155 1236 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 CXCL10P02778 98 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 CSF2RAP15509 400 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 SELPP16109 830 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 RFC5P40937 340 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 UBA7P41226 1012 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 TBC1D8BQ0IIM8 1120 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 MAPK7Q13164 816 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 EMC2Q15006 297 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 ARSHQ5FYA8 562 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 XKR9Q5GH70 373 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 MFSD5Q6N075 450 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 EFCAB12Q6NXP0 572 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 C1orf186Q6ZWK4 172 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 LRRC8DQ7L1W4 858 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 DAW1Q8N136 415 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 TMEM40Q8WWA1 233 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 BADQ92934 168 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 SCLYQ96I15 445 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 SPATA32Q96LK8 384 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 GDF15Q99988 308 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 SCAND2PQ9GZW5 306 aaPredicted RBP10.04□□□□□ -0.8
CHD8-214ENST00000557727 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
CHD8-214ENST00000557727 ADAMTS10Q9H324 1103 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
CHD8-214ENST00000557727 VTNP04004 478 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 CTSHP09668 335 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 RAG1P15918 1043 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 CYP11B2P19099 503 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
CHD8-214ENST00000557727 ARL2P36404 184 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 THPOP40225 353 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 MAGEA10P43363 369 aaPredicted RBP10.03□□□□□ -0.8
CHD8-214ENST00000557727 ME1P48163 572 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 GPC3P51654 580 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 CCL23P55773 120 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
CHD8-214ENST00000557727 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 BFSP2Q13515 415 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
CHD8-214ENST00000557727 ADALQ6DHV7 355 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 RINT1Q6NUQ1 792 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 OTUD6AQ7L8S5 288 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 KSR1Q8IVT5 923 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 SYT2Q8N9I0 419 aaPredicted RBP10.03□□□□□ -0.8
CHD8-214ENST00000557727 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 ASAP3Q8TDY4 903 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 BSNDQ8WZ55 320 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 RAD54LQ92698 747 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 TMEM143Q96AN5 459 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 NT5C3AQ9H0P0 336 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 GOLPH3LQ9H4A5 285 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 GPRC5CQ9NQ84 441 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 NOD1Q9Y239 953 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 NR2E3Q9Y5X4 410 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 CDY2AQ9Y6F7 541 aa10.03□□□□□ -0.8
CHD8-214ENST00000557727 A0A1W2PQ27 194 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 A0A1W2PQ64 194 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 A0A1W2PQD8 194 aa10.02□□□□□ -0.81
CHD8-214ENST00000557727 RSPH10B2B2RC85 870 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms