RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 KCNA5P22460 613 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 LTBRP36941 435 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 QARSP47897 775 aaKnown RBP11.89□□□□□ -0.51
PSMC6-215ENST00000557517 MRE11P49959 708 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 DRP2Q13474 957 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 PUS10Q3MIT2 529 aaKnown RBP11.89□□□□□ -0.51
PSMC6-215ENST00000557517 FAM178BQ8IXR5 827 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 KLHL23Q8NBE8 558 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 NSUN7Q8NE18 718 aaKnown RBP11.89□□□□□ -0.51
PSMC6-215ENST00000557517 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 LRFN2Q9ULH4 789 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 CACNA1HO95180 2353 aa11.89□□□□□ -0.51
PSMC6-215ENST00000557517 A0A0U1RQF3 1178 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSMC6-215ENST00000557517 LARGE1O95461 756 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 ITGB1P05556 798 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 ZSCAN20P17040 1043 aaPredicted RBP11.88□□□□□ -0.51
PSMC6-215ENST00000557517 DNAJB1P25685 340 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 GATMP50440 423 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 DNM2P50570 870 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 HYAL1Q12794 435 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 NR5A1Q13285 461 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 EPHA7Q15375 998 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 C4orf19Q8IY42 314 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 ATP6V0A4Q9HBG4 840 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 CHST12Q9NRB3 414 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
PSMC6-215ENST00000557517 PPME1Q9Y570 386 aa11.88□□□□□ -0.51
PSMC6-215ENST00000557517 TMEM150BA6NC51 233 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 BTBD18B2RXH4 712 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SLITRK3O94933 977 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 EOMESO95936 686 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 KRT2P35908 639 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 UBE3AQ05086 875 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 ADAM15Q13444 863 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 MTERF2Q49AM1 385 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
PSMC6-215ENST00000557517 EXOC8Q8IYI6 725 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SLFN12Q8IYM2 578 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 GJD3Q8N144 294 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SNX27Q96L92 541 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 CASD1Q96PB1 797 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 HSD17B14Q9BPX1 270 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 JPH2Q9BR39 696 aaPredicted RBP11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SH2D3AQ9BRG2 576 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 TMEM117Q9H0C3 514 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 KCNH6Q9H252 994 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 DHX33Q9H6R0 707 aaKnown RBP11.87□□□□□ -0.51
PSMC6-215ENST00000557517 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SUCLA2Q9P2R7 463 aaPredicted RBP11.87□□□□□ -0.51
PSMC6-215ENST00000557517 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SEPT9Q9UHD8 586 aaPredicted RBP11.87□□□□□ -0.51
PSMC6-215ENST00000557517 SIP14410 1827 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
PSMC6-215ENST00000557517 TBKBP1A7MCY6 615 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 HOXA2O43364 376 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 FGFR1P11362 822 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 NHLH1Q02575 133 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 ST3GAL1Q11201 340 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 PAN2Q504Q3 1202 aaKnown RBP11.86□□□□□ -0.51
PSMC6-215ENST00000557517 PTCRAQ6ISU1 281 aaPredicted RBP11.86□□□□□ -0.51
PSMC6-215ENST00000557517 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 ECHDC2Q86YB7 292 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 POF1BQ8WVV4 589 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 ZNF668Q96K58 619 aaPredicted RBP11.86□□□□□ -0.51
PSMC6-215ENST00000557517 MTMR9Q96QG7 549 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 GCOM2Q9BZD3 368 aaPredicted RBP11.86□□□□□ -0.51
PSMC6-215ENST00000557517 INO80BQ9C086 356 aaPredicted RBP11.86□□□□□ -0.51
PSMC6-215ENST00000557517 CWH43Q9H720 699 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 RNF19AQ9NV58 838 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 RGL1Q9NZL6 768 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 PCDHA12Q9UN75 941 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 LIMCH1Q9UPQ0 1083 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 PCDHB12Q9Y5F1 795 aa11.86□□□□□ -0.51
PSMC6-215ENST00000557517 MYO7AQ13402 2215 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 A0A087WZ62 844 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 H3BQ06 376 aaPredicted RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 JAK2O60674 1132 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 ZNF623O75123 536 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 CSDE1O75534 798 aaKnown RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 FGF18O76093 207 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 LYPLA2O95372 231 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 IRS1P35568 1242 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 NPEPPSP55786 919 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 PLCB3Q01970 1234 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 DLX2Q07687 328 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms