RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 USO1O60763 962 aaKnown RBP15.35■□□□□ 0.05
VPS33B-206ENST00000557358 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
VPS33B-206ENST00000557358 TOB1P50616 345 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-206ENST00000557358 RAB27AP51159 221 aa15.35■□□□□ 0.05
VPS33B-206ENST00000557358 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
VPS33B-206ENST00000557358 RTN4RL1Q86UN2 441 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-206ENST00000557358 RNF149Q8NC42 400 aa15.35■□□□□ 0.05
VPS33B-206ENST00000557358 LINC01599Q8WXQ3 324 aa15.35■□□□□ 0.05
VPS33B-206ENST00000557358 DNM3Q9UQ16 869 aa15.35■□□□□ 0.05
VPS33B-206ENST00000557358 PIN4Q9Y237 131 aaKnown RBP15.35■□□□□ 0.05
VPS33B-206ENST00000557358 ARID2Q68CP9 1835 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 TBKBP1A7MCY6 615 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 C9IYK1 514 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 ZBTB39O15060 712 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 MED24O75448 989 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 EOMESO95936 686 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 SPATA31C1P0DKV0 1188 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 POU3F3P20264 500 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-206ENST00000557358 ATP2C1P98194 919 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-206ENST00000557358 GRB10Q13322 594 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 GPM6BQ13491 265 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 CCDC85BQ15834 202 aaPredicted RBP15.34■□□□□ 0.05
VPS33B-206ENST00000557358 PAN2Q504Q3 1202 aaKnown RBP15.34■□□□□ 0.05
VPS33B-206ENST00000557358 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 KSR1Q8IVT5 923 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 KCTD17Q8N5Z5 321 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 C4orf32Q8N8J7 132 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
VPS33B-206ENST00000557358 RNF169Q8NCN4 708 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 C17orf80Q9BSJ5 609 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 PLVAPQ9BX97 442 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 NT5C3AQ9H0P0 336 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 PCDHB12Q9Y5F1 795 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 COL4A6Q14031 1691 aa15.34■□□□□ 0.05
VPS33B-206ENST00000557358 RALGAPA2Q2PPJ7 1873 aa15.33■□□□□ 0.05
VPS33B-206ENST00000557358 A0A0U1RQF3 1178 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 CARNS1A5YM72 827 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 INO80B-WBP1J3KQ70 363 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 RFXAPO00287 272 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 MGEA5O60502 916 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 ARHGEF15O94989 841 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 FGFR4P22455 802 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 AXLP30530 894 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 BMPR1AP36894 532 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 FAM189BP81408 668 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 POU5F1BQ06416 359 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 ADGRE1Q14246 886 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 DSC3Q14574 896 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 ZRSR1Q15695 479 aaKnown RBP15.33■□□□□ 0.04
VPS33B-206ENST00000557358 CSPP1Q1MSJ5 1256 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 NAALADL2Q58DX5 795 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 FAM102BQ5T8I3 360 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 PADI6Q6TGC4 694 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 HACE1Q8IYU2 909 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 IGSF22Q8N9C0 903 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 ZNF689Q96CS4 500 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-206ENST00000557358 PGBD4Q96DM1 585 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 IFT74Q96LB3 600 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 TMEM117Q9H0C3 514 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 POLR3FQ9H1D9 316 aaPredicted RBP15.33■□□□□ 0.04
VPS33B-206ENST00000557358 C2orf40Q9H1Z8 148 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 DDX19AQ9NUU7 478 aaKnown RBP15.33■□□□□ 0.04
VPS33B-206ENST00000557358 NLRC5Q86WI3 1866 aa15.33■□□□□ 0.04
VPS33B-206ENST00000557358 PRRC2BQ5JSZ5 2229 aaKnown RBP15.32■□□□□ 0.04
VPS33B-206ENST00000557358 VWA3AA6NCI4 1184 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 H3BNC9 293 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 SLC26A4O43511 780 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 CSDE1O75534 798 aaKnown RBP15.32■□□□□ 0.04
VPS33B-206ENST00000557358 SYT1P21579 422 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 TMEM132AQ24JP5 1023 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 TIGD5Q53EQ6 642 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 MAEAQ7L5Y9 396 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.32■□□□□ 0.04
VPS33B-206ENST00000557358 CLP1Q92989 425 aaKnown RBP15.32■□□□□ 0.04
VPS33B-206ENST00000557358 PPP2R3CQ969Q6 453 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 CCDC51Q96ER9 411 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 AK8Q96MA6 479 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
VPS33B-206ENST00000557358 LMAN2LQ9H0V9 348 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 ZSCAN16Q9H4T2 348 aaPredicted RBP15.32■□□□□ 0.04
VPS33B-206ENST00000557358 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 MTCH2Q9Y6C9 303 aa15.32■□□□□ 0.04
VPS33B-206ENST00000557358 EPOPA6NHQ4 379 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 C5orf67F2Z3F1 127 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 LAG3P18627 525 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 CYP11B2P19099 503 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 ARL2P36404 184 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 UBA7P41226 1012 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 PTENP60484 403 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 AAK1Q2M2I8 961 aa15.31■□□□□ 0.04
VPS33B-206ENST00000557358 NOTUMQ6P988 496 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms