RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	WNT10A	Q9GZT5	417 aa		5.77	□□□□□ -1.49
SCFD1-223	ENST00000557076	USP44	Q9H0E7	712 aa		5.77	□□□□□ -1.49
SCFD1-223	ENST00000557076	DNAJC18	Q9H819	358 aa		5.77	□□□□□ -1.49
SCFD1-223	ENST00000557076	FAM8A1	Q9UBU6	413 aa		5.77	□□□□□ -1.49
SCFD1-223	ENST00000557076	ST14	Q9Y5Y6	855 aa		5.77	□□□□□ -1.49
SCFD1-223	ENST00000557076	MAST2	Q6P0Q8	1798 aa		5.77	□□□□□ -1.49
SCFD1-223	ENST00000557076		A0A0U1RQG5	324 aa	Predicted RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076		H3BS24	57 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	TLR3	O15455	904 aa	Known RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	DCX	O43602	365 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	SLC25A27	O95847	323 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	GH2	P01242	217 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CELA3A	P09093	270 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CYP7A1	P22680	504 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CFP	P27918	469 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	IL15	P40933	162 aa	Predicted RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	KIR3DL1	P43629	444 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	TIMM10	P62072	90 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	NKX3-2	P78367	333 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	FGD1	P98174	961 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	INPP5A	Q14642	412 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	SHROOM1	Q2M3G4	852 aa	Predicted RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	KRT40	Q6A162	431 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	PRR23B	Q6ZRT6	265 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	SIAH1	Q8IUQ4	282 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	HID1	Q8IV36	788 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	SLC43A3	Q8NBI5	491 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	PHOSPHO2	Q8TCD6	241 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	TGFBRAP1	Q8WUH2	860 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	VWCE	Q96DN2	955 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	PLPPR2	Q96GM1	343 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	ALPK1	Q96QP1	1244 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	FEZ1	Q99689	392 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	PRRX2	Q99811	253 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	RPAP3	Q9H6T3	665 aa	Predicted RBP	5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	C12orf49	Q9H741	205 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	FBRS	Q9HAH7	460 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	C19orf73	Q9NVV2	129 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	FAM184B	Q9ULE4	1060 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	PALD1	Q9ULE6	856 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CNPY2	Q9Y2B0	182 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CAPN6	Q9Y6Q1	641 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CHD8	Q9HCK8	2581 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	CACNA1B	Q00975	2339 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	DCHS1	Q96JQ0	3298 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	WDR87	Q6ZQQ6	2873 aa		5.76	□□□□□ -1.49
SCFD1-223	ENST00000557076	EPOP	A6NHQ4	379 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	KIF28P	B7ZC32	967 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	NFIB	O00712	420 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	LPXN	O60711	386 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	IGSF3	O75054	1194 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	BRD1	O95696	1058 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ASGR1	P07306	291 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	CA3	P07451	260 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	PFKM	P08237	780 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ADORA1	P30542	326 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ETF1	P62495	437 aa	Known RBP	5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	TAP1	Q03518	808 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ZYX	Q15942	572 aa	Known RBP	5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	LETMD1	Q6P1Q0	360 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	SV2B	Q7L1I2	683 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ERMP1	Q7Z2K6	904 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	C1QL4	Q86Z23	238 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	WDR63	Q8IWG1	891 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ACER1	Q8TDN7	264 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	GAL3ST3	Q96A11	431 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	HIPK3	Q9H422	1215 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	SPC25	Q9HBM1	224 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	ADAMTS5	Q9UNA0	930 aa		5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	TPR	P12270	2363 aa	Known RBP	5.75	□□□□□ -1.49
SCFD1-223	ENST00000557076	FAM186A	A6NE01	2351 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	CABYR	O75952	493 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	SNAI1	O95863	264 aa	Predicted RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	CST3	P01034	146 aa	Predicted RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	HLA-DOA	P06340	250 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	RAC2	P15153	192 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	GJA9	P57773	515 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	EXOSC9	Q06265	439 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	GRB10	Q13322	594 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	MVP	Q14764	893 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	RAB3GAP1	Q15042	981 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	NKG7	Q16617	165 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	CERKL	Q49MI3	558 aa	Predicted RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	MAMDC4	Q6UXC1	1216 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	BMP8A	Q7Z5Y6	402 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	SPATA5	Q8NB90	893 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	ARNTL2	Q8WYA1	636 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	FRMD6	Q96NE9	622 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	MMP19	Q99542	508 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	NOL10	Q9BSC4	688 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	NOC4L	Q9BVI4	516 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	UPF3B	Q9BZI7	483 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	IRF2BPL	Q9H1B7	796 aa		5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	UPF3A	Q9H1J1	476 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	NSUN3	Q9H649	340 aa	Known RBP	5.74	□□□□□ -1.49
SCFD1-223	ENST00000557076	CABP5	Q9NP86	173 aa		5.74	□□□□□ -1.49

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