RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 LRRD1A4D1F6 860 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 MT-ND3P03897 115 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 NDUFA8P51970 172 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 MRRFQ96E11 262 aaKnown RBP12.79□□□□□ -0.36
NEK9-210ENST00000557026 CHMP6Q96FZ7 201 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 ZFP91Q96JP5 570 aaPredicted RBP12.79□□□□□ -0.36
NEK9-210ENST00000557026 EPAS1Q99814 870 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 CALN1Q9BXU9 219 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 ADAM22Q9P0K1 906 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 SUN2Q9UH99 717 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 ZC3H13Q5T200 1668 aaKnown RBP12.79□□□□□ -0.36
NEK9-210ENST00000557026 ATP6V1E1P36543 226 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 CEP55Q53EZ4 464 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 THNSL1Q8IYQ7 743 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 RIT2Q99578 217 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 CDC23Q9UJX2 597 aa12.79□□□□□ -0.36
NEK9-210ENST00000557026 PCK1P35558 622 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 ARL4CP56559 192 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 GDAP1L1Q96MZ0 367 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 MED15Q96RN5 788 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 VCPKMTQ9H867 229 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 PYGBP11216 843 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 ELAVL2Q12926 359 aaKnown RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 TSTA3Q13630 321 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 TBCCQ15814 346 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 DCAF4L1Q3SXM0 396 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 RABEP2Q9H5N1 569 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 POLIQ9UNA4 740 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 CFAP65Q6ZU64 1925 aaKnown RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 PPP1R12AO14974 1030 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 COBLO75128 1261 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 TTC31Q49AM3 519 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 HSP90AA5PQ58FG0 334 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 GUF1Q8N442 669 aaKnown RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 GABBR1Q9UBS5 961 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 INPP5FQ9Y2H2 1132 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 PRAMEF22A3QJZ6 481 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 PRKAB2O43741 272 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 SLC26A2P50443 739 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 TMED2Q15363 201 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 SV2CQ496J9 727 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 SPATA2LQ8IUW3 424 aaPredicted RBP12.78□□□□□ -0.36
NEK9-210ENST00000557026 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 ASIC4Q96FT7 647 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
NEK9-210ENST00000557026 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.36
NEK9-210ENST00000557026 NVLO15381 856 aaKnown RBP12.77□□□□□ -0.36
NEK9-210ENST00000557026 APOA4P06727 396 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 MX2P20592 715 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 DEUP1Q05D60 604 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 HLFQ16534 295 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 DGKDQ16760 1214 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 KLHL38Q2WGJ6 581 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 TEDDM1Q5T9Z0 273 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 TJP2Q9UDY2 1190 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 MEIS1O00470 390 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 ZW10O43264 779 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 SORBS3O60504 671 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 NR3C1P04150 777 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 PYGLP06737 847 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 HUNKP57058 714 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 CCL15Q16663 113 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 RABL6Q3YEC7 729 aaPredicted RBP12.77□□□□□ -0.36
NEK9-210ENST00000557026 C12orf60Q5U649 245 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 KAZNQ674X7 775 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 FRA10AC1Q70Z53 315 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.36
NEK9-210ENST00000557026 GPRASP2Q96D09 838 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 FSD1LQ9BXM9 530 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 ARHGEF40Q8TER5 1519 aa12.77□□□□□ -0.36
NEK9-210ENST00000557026 MTSS1O43312 755 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 KNOP1Q1ED39 458 aaKnown RBP12.77□□□□□ -0.37
NEK9-210ENST00000557026 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 OPTNQ96CV9 577 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 PPCSQ9HAB8 311 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 SP110Q9HB58 689 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 GLI2P10070 1586 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 SNX2O60749 519 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 SLC2A3P11169 496 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 SLC1A1P43005 524 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 GPC5P78333 572 aa12.77□□□□□ -0.37
NEK9-210ENST00000557026 CTTNQ14247 550 aaKnown RBP12.77□□□□□ -0.37
NEK9-210ENST00000557026 CELF1Q92879 486 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms