RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ADGRA3Q8IWK6 1321 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 TRANK1O15050 2925 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 SRGAP2CP0DJJ0 459 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 PDIA4P13667 645 aaKnown RBP25.41■■□□□ 1.66
TDP1-216ENST00000556867 ZSCAN20P17040 1043 aaPredicted RBP25.41■■□□□ 1.66
TDP1-216ENST00000556867 FAM189BP81408 668 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 PADI6Q6TGC4 694 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 RNF149Q8NC42 400 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 AK8Q96MA6 479 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 GAS2L1Q99501 681 aaPredicted RBP25.41■■□□□ 1.66
TDP1-216ENST00000556867 CERS4Q9HA82 394 aa25.41■■□□□ 1.66
TDP1-216ENST00000556867 RALGAPA2Q2PPJ7 1873 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 NLRC5Q86WI3 1866 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 COL4A4P53420 1690 aaPredicted RBP25.4■■□□□ 1.66
TDP1-216ENST00000556867 POU5F1BQ06416 359 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 TFDP1Q14186 410 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 HYIQ5T013 277 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 ASAP3Q8TDY4 903 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 ARNTL2Q8WYA1 636 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 POLR3FQ9H1D9 316 aaPredicted RBP25.4■■□□□ 1.66
TDP1-216ENST00000556867 BHMT2Q9H2M3 363 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 CHST12Q9NRB3 414 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 LRFN2Q9ULH4 789 aa25.4■■□□□ 1.66
TDP1-216ENST00000556867 EPOPA6NHQ4 379 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 CYP11B2P19099 503 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 GLRA2P23416 452 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 PHKA2P46019 1235 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 CAPSQ13938 189 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 ADGRE1Q14246 886 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 PTPAQ15257 358 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 FAM173BQ6P4H8 233 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 IFNLR1Q8IU57 520 aaPredicted RBP25.39■■□□□ 1.66
TDP1-216ENST00000556867 KCTD17Q8N5Z5 321 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 SAMD11Q96NU1 681 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 ELAC1Q9H777 363 aaKnown RBP25.39■■□□□ 1.66
TDP1-216ENST00000556867 TMEM161AQ9NX61 479 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 DNM3Q9UQ16 869 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 PCDHB7Q9Y5E2 793 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 CLIC4Q9Y696 253 aa25.39■■□□□ 1.66
TDP1-216ENST00000556867 SLC26A4O43511 780 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 EYA4O95677 639 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 PTENP60484 403 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 CATSPER4Q7RTX7 472 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 CMTR2Q8IYT2 770 aaKnown RBP25.38■■□□□ 1.65
TDP1-216ENST00000556867 MINDY3Q9H8M7 445 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 GPRC5CQ9NQ84 441 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 DACT1Q9NYF0 836 aa25.38■■□□□ 1.65
TDP1-216ENST00000556867 FNDC1Q4ZHG4 1894 aaPredicted RBP25.38■■□□□ 1.65
TDP1-216ENST00000556867 LONP1P36776 959 aaKnown RBP25.37■■□□□ 1.65
TDP1-216ENST00000556867 FIBCD1Q8N539 461 aa25.37■■□□□ 1.65
TDP1-216ENST00000556867 C17orf80Q9BSJ5 609 aa25.37■■□□□ 1.65
TDP1-216ENST00000556867 TRAIPQ9BWF2 469 aa25.37■■□□□ 1.65
TDP1-216ENST00000556867 NFKBIZQ9BYH8 718 aa25.37■■□□□ 1.65
TDP1-216ENST00000556867 NT5C3AQ9H0P0 336 aa25.37■■□□□ 1.65
TDP1-216ENST00000556867 AGPAT5Q9NUQ2 364 aa25.37■■□□□ 1.65
TDP1-216ENST00000556867 PIN4Q9Y237 131 aaKnown RBP25.37■■□□□ 1.65
TDP1-216ENST00000556867 MORC2Q9Y6X9 1032 aaPredicted RBP25.37■■□□□ 1.65
TDP1-216ENST00000556867 E9PMD0 336 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 BTG3Q14201 252 aaPredicted RBP25.36■■□□□ 1.65
TDP1-216ENST00000556867 PCBP1Q15365 356 aaKnown RBP eCLIP25.36■■□□□ 1.65
TDP1-216ENST00000556867 FAM102BQ5T8I3 360 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 MAEAQ7L5Y9 396 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 KCNK18Q7Z418 384 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 ECHDC2Q86YB7 292 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 PNMA5Q96PV4 448 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 MTUS1Q9ULD2 1270 aa25.36■■□□□ 1.65
TDP1-216ENST00000556867 A0A0U1RQF3 1178 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 RFXAPO00287 272 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 LINC00271P0C7V0 271 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 IBSPP21815 317 aaPredicted RBP25.35■■□□□ 1.65
TDP1-216ENST00000556867 GRIN1Q05586 938 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 GRB10Q13322 594 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 TMEM119Q4V9L6 283 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 CABP7Q86V35 215 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 MAFAQ8NHW3 353 aaPredicted RBP25.35■■□□□ 1.65
TDP1-216ENST00000556867 CLP1Q92989 425 aaKnown RBP25.35■■□□□ 1.65
TDP1-216ENST00000556867 USP28Q96RU2 1077 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 KIAA1671Q9BY89 1806 aa25.35■■□□□ 1.65
TDP1-216ENST00000556867 POU3F3P20264 500 aaPredicted RBP25.34■■□□□ 1.65
TDP1-216ENST00000556867 GATMP50440 423 aa25.34■■□□□ 1.65
TDP1-216ENST00000556867 ZRSR1Q15695 479 aaKnown RBP25.34■■□□□ 1.65
TDP1-216ENST00000556867 EPC2Q52LR7 807 aa25.34■■□□□ 1.65
TDP1-216ENST00000556867 TMEM192Q8IY95 271 aa25.34■■□□□ 1.65
TDP1-216ENST00000556867 SPRYD3Q8NCJ5 442 aa25.34■■□□□ 1.65
TDP1-216ENST00000556867 CDK5RAP3Q96JB5 506 aa25.34■■□□□ 1.65
TDP1-216ENST00000556867 RWDD3Q9Y3V2 267 aa25.34■■□□□ 1.65
TDP1-216ENST00000556867 PRRC2BQ5JSZ5 2229 aaKnown RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 INO80B-WBP1J3KQ70 363 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 HOXA2O43364 376 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 LPXNO60711 386 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 ZSCAN22P10073 491 aaPredicted RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 UBA7P41226 1012 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 MBTD1Q05BQ5 628 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 CDCA2Q69YH5 1023 aaPredicted RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 TWF2Q6IBS0 349 aaKnown RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 ZNF598Q86UK7 904 aaKnown RBP25.33■■□□□ 1.65
TDP1-216ENST00000556867 FBXO22Q8NEZ5 403 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 GDPD5Q8WTR4 605 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 BSNDQ8WZ55 320 aa25.33■■□□□ 1.65
TDP1-216ENST00000556867 KIFAP3Q92845 792 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms