RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 ARHGAP6O43182 974 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 CUTAO60888 179 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 SOD2P04179 222 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 PDE6AP16499 860 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 SLC25A3Q00325 362 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 IFRD2Q12894 506 aaPredicted RBP4.34□□□□□ -1.71
RDH11-208ENST00000556692 HABP4Q5JVS0 413 aaKnown RBP4.34□□□□□ -1.71
RDH11-208ENST00000556692 CD276Q5ZPR3 534 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.71
RDH11-208ENST00000556692 ADGRE4PQ86SQ3 457 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 IFNL3Q8IZI9 196 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 SLC43A3Q8NBI5 491 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 SCYL1Q96KG9 808 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 SIN3AQ96ST3 1273 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 MPHOSPH9Q99550 1183 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 TACO1Q9BSH4 297 aaKnown RBP4.34□□□□□ -1.71
RDH11-208ENST00000556692 IPPKQ9H8X2 491 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 HECAQ9UBI9 543 aaPredicted RBP4.34□□□□□ -1.71
RDH11-208ENST00000556692 FRMPD1Q5SYB0 1578 aa4.34□□□□□ -1.71
RDH11-208ENST00000556692 IQGAP1P46940 1657 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 ZC3H13Q5T200 1668 aaKnown RBP4.33□□□□□ -1.72
RDH11-208ENST00000556692 ATP7AQ04656 1500 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 ZMYM4Q5VZL5 1548 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 LMTK2Q8IWU2 1503 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 ROCK2O75116 1388 aaKnown RBP4.33□□□□□ -1.72
RDH11-208ENST00000556692 TRAV20A0A0B4J274 112 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 ESYT3A0FGR9 886 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 ACOT7O00154 380 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 IL18BPO95998 194 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 GPR85P60893 370 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 STYK1Q6J9G0 422 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 KCTD1Q719H9 257 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 MRGPREQ86SM8 312 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.33□□□□□ -1.72
RDH11-208ENST00000556692 TMEM176AQ96HP8 235 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 GMLQ99445 158 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 ZFYVE21Q9BQ24 234 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 CD244Q9BZW8 370 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 NELFAQ9H3P2 528 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 TRAF6Q9Y4K3 522 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 NUB1Q9Y5A7 615 aa4.33□□□□□ -1.72
RDH11-208ENST00000556692 MROH1Q8NDA8 1641 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 ALKQ9UM73 1620 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 GPRASP1Q5JY77 1395 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 KTN1Q86UP2 1357 aaKnown RBP4.32□□□□□ -1.72
RDH11-208ENST00000556692 TCRBV5S4A2TA0A5A2 114 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 FAM47E-STBD1D6RA91 191 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 EPHA5P54756 1037 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 CNGB1Q14028 1251 aaPredicted RBP4.32□□□□□ -1.72
RDH11-208ENST00000556692 RAB33AQ14088 237 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 LRRC47Q8N1G4 583 aaKnown RBP4.32□□□□□ -1.72
RDH11-208ENST00000556692 ST13P5Q8NFI4 369 aaPredicted RBP4.32□□□□□ -1.72
RDH11-208ENST00000556692 SH3RF2Q8TEC5 729 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 PDGFDQ9GZP0 370 aaPredicted RBP4.32□□□□□ -1.72
RDH11-208ENST00000556692 MSL2Q9HCI7 577 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 SLC39A2Q9NP94 309 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 RRP7BPQ9NSQ0 103 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 MYO3AQ8NEV4 1616 aa4.32□□□□□ -1.72
RDH11-208ENST00000556692 EFCAB6Q5THR3 1501 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 ZNF644Q9H582 1327 aaPredicted RBP4.31□□□□□ -1.72
RDH11-208ENST00000556692 KIF1BO60333 1816 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 ZNF839A8K0R7 811 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 KIAA0355O15063 1070 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 TOP3AQ13472 1001 aaPredicted RBP4.31□□□□□ -1.72
RDH11-208ENST00000556692 NFYCQ13952 458 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 TBR1Q16650 682 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 SPTY2D1Q68D10 685 aaPredicted RBP4.31□□□□□ -1.72
RDH11-208ENST00000556692 SPATC1Q76KD6 591 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 ALG1Q9BT22 464 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 SPATA9Q9BWV2 254 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 KIDINS220Q9ULH0 1771 aa4.31□□□□□ -1.72
RDH11-208ENST00000556692 NEO1Q92859 1461 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 FER1L4A9Z1Z3 1794 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 CCDC7Q96M83 1385 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.3□□□□□ -1.72
RDH11-208ENST00000556692 TSPY4P0CV99 314 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 TSPY10P0CW01 314 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 DBPQ10586 325 aaPredicted RBP4.3□□□□□ -1.72
RDH11-208ENST00000556692 BTBD8Q5XKL5 378 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 ARHGAP36Q6ZRI8 547 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 ZNF662Q6ZS27 426 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 RD3Q7Z3Z2 195 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 HDGFL2Q7Z4V5 671 aaPredicted RBP4.3□□□□□ -1.72
RDH11-208ENST00000556692 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 TRIM55Q9BYV6 548 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 UTRNP46939 3433 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 MYOM2P54296 1465 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 ZNF518AQ6AHZ1 1483 aa4.3□□□□□ -1.72
RDH11-208ENST00000556692 ARHGEF17Q96PE2 2063 aaPredicted RBP4.3□□□□□ -1.72
RDH11-208ENST00000556692 CCDC144AA2RUR9 1427 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 PRAG1Q86YV5 1406 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 SIGLEC1Q9BZZ2 1709 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 SYNMO15061 1565 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 REREQ9P2R6 1566 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 FAM90A27PA6NNH2 459 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 ANP32CO43423 234 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 PTPAQ15257 358 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 FOXB2Q5VYV0 432 aa4.29□□□□□ -1.72
RDH11-208ENST00000556692 OLFML1Q6UWY5 402 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms