RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 NLRX1Q86UT6 975 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 SLC9A9Q8IVB4 645 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 GSPT2Q8IYD1 628 aaKnown RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 LNX1Q8TBB1 728 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 MS4A14Q96JA4 679 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 INPP4AQ96PE3 977 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 ACCSQ96QU6 501 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 HINFPQ9BQA5 517 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 MOV10L1Q9BXT6 1211 aaKnown RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 GOLPH3Q9H4A6 298 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 LARSQ9P2J5 1176 aaKnown RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 FBXL5Q9UKA1 691 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 DNAJC12Q9UKB3 198 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 HYOU1Q9Y4L1 999 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 PTPRFP10586 1907 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 ADM5C9JUS6 153 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 F8VZ95 297 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 USP2O75604 605 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 ADRB2P07550 413 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 FDX1P10109 184 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 OAZ1P54368 228 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 NCKAP1LP55160 1127 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 PPP3CAQ08209 521 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 VGLL4Q14135 290 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 DRAP1Q14919 205 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 GLIPR1L2Q4G1C9 344 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 CCDC125Q86Z20 511 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 GPRASP2Q96D09 838 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 TEX13BQ9BXU2 312 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 UBXN6Q9BZV1 441 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM260-211ENST00000556648 HSPBP1Q9NZL4 362 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 TMOD4Q9NZQ9 345 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 NAGPAQ9UK23 515 aa11.04□□□□□ -0.64
TMEM260-211ENST00000556648 SBF1O95248 1867 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 EMSYQ7Z589 1322 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ANKRD63C9JTQ0 380 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 PPP1R12BO60237 982 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 EVI5O60447 810 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 DDNO94850 711 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 MAPTP10636 758 aaKnown RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 SFNP31947 248 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 CNTN2Q02246 1040 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 PPP2R5AQ15172 486 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 PHLDB3Q6NSJ2 640 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ZNF746Q6NUN9 644 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ARHGEF19Q8IW93 802 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 CCDC60Q8IWA6 550 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 GPC2Q8N158 579 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 RNF10Q8N5U6 811 aaKnown RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 LMO3Q8TAP4 145 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 GOLGA5Q8TBA6 731 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 NSUN6Q8TEA1 469 aaKnown RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ZNF526Q8TF50 670 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ACAD9Q9H845 621 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 PFASO15067 1338 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 ADGRA3Q8IWK6 1321 aa11.03□□□□□ -0.64
TMEM260-211ENST00000556648 CCDC169A6NNP5 214 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 H3BQF6 201 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.64
TMEM260-211ENST00000556648 SOX5P35711 763 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 MATR3P43243 847 aaKnown RBP eCLIP11.02□□□□□ -0.64
TMEM260-211ENST00000556648 NPTX2P47972 431 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 GCLMP48507 274 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 GTF2BQ00403 316 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 SP2Q02086 613 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 SWSAP1Q6NVH7 229 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 ZNF572Q7Z3I7 529 aaPredicted RBP11.02□□□□□ -0.64
TMEM260-211ENST00000556648 U2AF1L4Q8WU68 220 aaKnown RBP11.02□□□□□ -0.64
TMEM260-211ENST00000556648 HDAC7Q8WUI4 952 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 HNRNPLLQ8WVV9 542 aaKnown RBP11.02□□□□□ -0.64
TMEM260-211ENST00000556648 SAAL1Q96ER3 474 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 SENP7Q9BQF6 1050 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 TMEM206Q9H813 350 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 PCDHA10Q9Y5I2 948 aa11.02□□□□□ -0.64
TMEM260-211ENST00000556648 A0A0G2JMZ2 1700 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 MAP2K7O14733 419 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 ATP2A1O14983 1001 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 ATP8B1O43520 1251 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 MYBL2P10244 700 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 PRLRP16471 622 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 ADSSP30520 456 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 STAT1P42224 750 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 VAMP7P51809 220 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 WDR93Q6P2C0 686 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 SLC39A4Q6P5W5 647 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.65
TMEM260-211ENST00000556648 C12orf56Q8IXR9 622 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 TXLNBQ8N3L3 684 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 TMEM161BQ8NDZ6 487 aa11.02□□□□□ -0.65
TMEM260-211ENST00000556648 KAT5Q92993 513 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms