RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TMEM199Q8N511 208 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 HERVK_113Q902F9 699 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 SEZ6LQ9BYH1 1024 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 SPC25Q9HBM1 224 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ZNF287Q9HBT7 754 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 EPB41L4AQ9HCS5 686 aaPredicted RBP10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 RNF19AQ9NV58 838 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 CRIM1Q9NZV1 1036 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ZHX1Q9UKY1 873 aaPredicted RBP10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 MYO9BQ13459 2157 aa10.62□□□□□ -0.71
GTF2A1-204ENST00000556268 ASTN1O14525 1302 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 ZNF536O15090 1300 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 GRIN2DO15399 1336 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 GREB1LQ9C091 1923 aaPredicted RBP10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 GRXCR1A8MXD5 290 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 GPAA1O43292 621 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 CABYRO75952 493 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 ZFYP08048 801 aaPredicted RBP10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 ADMP35318 185 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 ZNF252P-AS1Q0IIN9 211 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 MAP7Q14244 749 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 SLFN13Q68D06 897 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 IQSEC1Q6DN90 963 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 STK11IPQ8N1F8 1099 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 STAG1Q8WVM7 1258 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 VWCEQ96DN2 955 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 FRMD6Q96NE9 622 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 DUSP9Q99956 384 aaKnown RBP10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 EMILIN2Q9BXX0 1053 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 BCL11AQ9H165 835 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 CBX8Q9HC52 389 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 PCMTD2Q9NV79 361 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 Q9Y3F1 56 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 PLXNA1Q9UIW2 1896 aa10.61□□□□□ -0.71
GTF2A1-204ENST00000556268 CHD9Q3L8U1 2897 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 ASB14A6NK59 587 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 PRDM1O75626 825 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 CELA3AP09093 270 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 ACRP10323 421 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 CYP2C18P33260 490 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 NOVP48745 357 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 TAPT1Q6NXT6 567 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 PSRC1Q6PGN9 363 aaPredicted RBP10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 MORC4Q8TE76 937 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 CHURC1Q8WUH1 139 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 ATXN2LQ8WWM7 1075 aaKnown RBP10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 TBC1D32Q96NH3 1257 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 IL23AQ9NPF7 189 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 A1CFQ9NQ94 594 aaKnown RBP10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 NCOR1O75376 2440 aa10.6□□□□□ -0.71
GTF2A1-204ENST00000556268 TMEM232C9JQI7 657 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 M0R2C6 588 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 FGBP02675 491 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 EIF4BP23588 611 aaKnown RBP10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 BEX3Q00994 111 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 TFAP4Q01664 338 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 C20orf194Q5TEA3 1177 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 ZAR1Q86SH2 424 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 FAM160B2Q86V87 743 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 GIMAP7Q8NHV1 300 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 GRIN3AQ8TCU5 1115 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 GPBAR1Q8TDU6 330 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 GATA6Q92908 595 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 FANCD2OSQ96PS1 177 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 ATXN3LQ9H3M9 355 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 ACAD9Q9H845 621 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 PLIN4Q96Q06 1357 aa10.59□□□□□ -0.71
GTF2A1-204ENST00000556268 MYH8P13535 1937 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 KIAA1324LA8MWY0 1029 aaPredicted RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 TLR3O15455 904 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 DYNC1LI2O43237 492 aaPredicted RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 APPP05067 770 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 FGRP09769 529 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 BMP6P22004 513 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 GRIK1P39086 918 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 TDO2P48775 406 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 PDE4BQ07343 736 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 ITGA7Q13683 1181 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 TMEM63BQ5T3F8 832 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 CXCL17Q6UXB2 119 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 LRRC47Q8N1G4 583 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 ASB2Q96Q27 587 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 NOC4LQ9BVI4 516 aaKnown RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 OSBPL1AQ9BXW6 950 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 GZF1Q9H116 711 aaPredicted RBP10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 MSRAQ9UJ68 235 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 RCAN3Q9UKA8 241 aa10.58□□□□□ -0.72
GTF2A1-204ENST00000556268 FOXP2O15409 715 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 TSPY3P0CV98 308 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms