RNA–Protein interactions for RNA: ENST00000556216.5

CGRRF1-204, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-204ENST00000556216 FERMT3Q86UX7 667 aa16.52■□□□□ 0.23
CGRRF1-204ENST00000556216 ZNF410Q86VK4 478 aa16.52■□□□□ 0.23
CGRRF1-204ENST00000556216 CMTR2Q8IYT2 770 aaKnown RBP16.52■□□□□ 0.23
CGRRF1-204ENST00000556216 MTRQ99707 1265 aa16.52■□□□□ 0.23
CGRRF1-204ENST00000556216 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 PP2D1A8MPX8 630 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 ATF7P17544 494 aaPredicted RBP16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 CDC25AP30304 524 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 CAMK1Q14012 370 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 LRRC55Q6ZSA7 311 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 ECHDC2Q86YB7 292 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 RNF149Q8NC42 400 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 ASAP3Q8TDY4 903 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 PSPC1Q8WXF1 523 aaKnown RBP16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 GPRC5CQ9NQ84 441 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 ANKEF1Q9NU02 776 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 TMEM161AQ9NX61 479 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 THEGQ9P2T0 379 aa16.51■□□□□ 0.23
CGRRF1-204ENST00000556216 PLXNA4Q9HCM2 1894 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 H3BQV1 296 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 DNAJB1P25685 340 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 LPPQ93052 612 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 ATP6V0A4Q9HBG4 840 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 LMCD1Q9NZU5 365 aa16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 PIN4Q9Y237 131 aaKnown RBP16.5■□□□□ 0.23
CGRRF1-204ENST00000556216 A0A0U1RQF3 1178 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 USO1O60763 962 aaKnown RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 KCNQ1P51787 676 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 CDC42EP1Q00587 391 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 ORC2Q13416 577 aaPredicted RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 CUL4AQ13619 759 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 CLLU1OSQ5K130 101 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 CATSPER4Q7RTX7 472 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 ZNF598Q86UK7 904 aaKnown RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 KLHL23Q8NBE8 558 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 MRPL38Q96DV4 380 aaKnown RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 CASD1Q96PB1 797 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 POLR3CQ9BUI4 534 aaPredicted RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 PPME1Q9Y570 386 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 DGAT1O75907 488 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 ITGB1P05556 798 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 SFPQP23246 707 aaKnown RBP eCLIP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 RPA1P27694 616 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 PBX3P40426 434 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 FXR2P51116 673 aaKnown RBP eCLIP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 CWH43Q9H720 699 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 ELAC1Q9H777 363 aaKnown RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 TUFT1Q9NNX1 390 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 LRWD1Q9UFC0 647 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.49■□□□□ 0.23
CGRRF1-204ENST00000556216 GLRA2P23416 452 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 HOXA11P31270 313 aaPredicted RBP16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 ARL2P36404 184 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 CAPSQ13938 189 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 TWF2Q6IBS0 349 aaKnown RBP16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 HELQQ8TDG4 1101 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 CCDC43Q96MW1 224 aaKnown RBP16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 PCDHGC5Q9Y5F6 944 aa16.48■□□□□ 0.23
CGRRF1-204ENST00000556216 RB1P06400 928 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 IRS1P35568 1242 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 CCT6AP40227 531 aaKnown RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 PHKA2P46019 1235 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 TCEAL5Q5H9L2 206 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 EXOC8Q8IYI6 725 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 IGSF22Q8N9C0 903 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 SPPL3Q8TCT6 385 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 ASB2Q96Q27 587 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 C11orf84Q9BUA3 381 aaPredicted RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 INO80BQ9C086 356 aaPredicted RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 GTF2F1P35269 517 aaKnown RBP eCLIP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 RILPL1Q5EBL4 403 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 SPOUT1Q5T280 376 aaKnown RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 ATXN2LQ8WWM7 1075 aaKnown RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 MMTAG2Q9BU76 263 aaKnown RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 POLR3FQ9H1D9 316 aaPredicted RBP16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 CHST12Q9NRB3 414 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 AGPAT5Q9NUQ2 364 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 KIAA1024Q9UPX6 916 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 RWDD3Q9Y3V2 267 aa16.47■□□□□ 0.23
CGRRF1-204ENST00000556216 GAS2O43903 313 aaKnown RBP16.46■□□□□ 0.23
CGRRF1-204ENST00000556216 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
CGRRF1-204ENST00000556216 PTENP60484 403 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms