RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CBX2Q14781 532 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-209ENST00000556102 INF2Q27J81 1249 aa21.15■□□□□ 0.98
CDKN3-209ENST00000556102 TMEM184AQ6ZMB5 413 aa21.15■□□□□ 0.98
CDKN3-209ENST00000556102 PHF7Q9BWX1 381 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-209ENST00000556102 CHST12Q9NRB3 414 aa21.15■□□□□ 0.98
CDKN3-209ENST00000556102 PDRG1Q9NUG6 133 aa21.15■□□□□ 0.98
CDKN3-209ENST00000556102 SPG21Q9NZD8 308 aa21.15■□□□□ 0.98
CDKN3-209ENST00000556102 MAFO75444 373 aaPredicted RBP21.14■□□□□ 0.97
CDKN3-209ENST00000556102 SFPQP23246 707 aaKnown RBP eCLIP21.14■□□□□ 0.97
CDKN3-209ENST00000556102 PBX3P40426 434 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 PSMC5P62195 406 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 KCNC3Q14003 757 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 HFE2Q6ZVN8 426 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 ZNF410Q86VK4 478 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 HELQQ8TDG4 1101 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 SUSD6Q92537 303 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 EDAQ92838 391 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 SH2D3AQ9BRG2 576 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 MRPL9Q9BYD2 267 aaKnown RBP21.14■□□□□ 0.97
CDKN3-209ENST00000556102 KCNJ14Q9UNX9 436 aa21.14■□□□□ 0.97
CDKN3-209ENST00000556102 A0A087WZ62 844 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 HIDE1A8MVS5 230 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 SLC37A4O43826 429 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 CDKL5O76039 1030 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 LETM2Q2VYF4 491 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 SLC39A11Q8N1S5 342 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 JPH2Q9BR39 696 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-209ENST00000556102 FDXACB1Q9BRP7 624 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-209ENST00000556102 TRAIPQ9BWF2 469 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 INO80BQ9C086 356 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-209ENST00000556102 KCNH6Q9H252 994 aa21.13■□□□□ 0.97
CDKN3-209ENST00000556102 SUCLA2Q9P2R7 463 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-209ENST00000556102 CCDC194A0A1B0GVG4 234 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 PHKA2P46019 1235 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 PPP2R5CQ13362 524 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 ANKRD54Q6NXT1 300 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 ANO5Q75V66 913 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 TMC7Q7Z402 723 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 RHPN2Q8IUC4 686 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 RSPH1Q8WYR4 309 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 FAM20AQ96MK3 541 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 PHF20Q9BVI0 1012 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 KCNMB3Q9NPA1 279 aa21.12■□□□□ 0.97
CDKN3-209ENST00000556102 STK36Q9NRP7 1315 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 EML1O00423 815 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 DKC1O60832 514 aaKnown RBP eCLIP21.11■□□□□ 0.97
CDKN3-209ENST00000556102 GCFC2P16383 781 aaKnown RBP21.11■□□□□ 0.97
CDKN3-209ENST00000556102 TECP42680 631 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 SCRN1Q12765 414 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 PLA2G4FQ68DD2 849 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 TWF2Q6IBS0 349 aaKnown RBP21.11■□□□□ 0.97
CDKN3-209ENST00000556102 NEK8Q86SG6 692 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 RPGRIP1Q96KN7 1286 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 MFSD14AQ96MC6 490 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 S1PR5Q9H228 398 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 VAV3Q9UKW4 847 aa21.11■□□□□ 0.97
CDKN3-209ENST00000556102 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
CDKN3-209ENST00000556102 SKIP12755 728 aa21.1■□□□□ 0.97
CDKN3-209ENST00000556102 HOXB8P17481 243 aaPredicted RBP21.1■□□□□ 0.97
CDKN3-209ENST00000556102 XBP1P17861 261 aa21.1■□□□□ 0.97
CDKN3-209ENST00000556102 QARSP47897 775 aaKnown RBP21.1■□□□□ 0.97
CDKN3-209ENST00000556102 ALDH7A1P49419 539 aaKnown RBP21.1■□□□□ 0.97
CDKN3-209ENST00000556102 SMC1AQ14683 1233 aaKnown RBP21.1■□□□□ 0.97
CDKN3-209ENST00000556102 PPP4R3AQ6IN85 833 aa21.1■□□□□ 0.97
CDKN3-209ENST00000556102 LLGL2Q6P1M3 1020 aa21.1■□□□□ 0.97
CDKN3-209ENST00000556102 SYCE2Q6PIF2 218 aa21.1■□□□□ 0.97
CDKN3-209ENST00000556102 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
CDKN3-209ENST00000556102 CYP26B1Q9NR63 512 aa21.1■□□□□ 0.97
CDKN3-209ENST00000556102 CARNS1A5YM72 827 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 RAB27AP51159 221 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 BCAR1P56945 870 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 TRIM67Q6ZTA4 783 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 CATSPER4Q7RTX7 472 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 BMP8AQ7Z5Y6 402 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 KSR1Q8IVT5 923 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 MRPL43Q8N983 215 aaKnown RBP21.09■□□□□ 0.97
CDKN3-209ENST00000556102 CASP10Q92851 521 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 TMEM169Q96HH4 297 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 NLRP4Q96MN2 994 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 NAP1L4Q99733 375 aaKnown RBP21.09■□□□□ 0.97
CDKN3-209ENST00000556102 PPME1Q9Y570 386 aa21.09■□□□□ 0.97
CDKN3-209ENST00000556102 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 NT5C1B-RDH14C9J2C7 533 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 TBX3O15119 743 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 PFKFB2O60825 505 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 P4HBP07237 508 aaKnown RBP21.08■□□□□ 0.97
CDKN3-209ENST00000556102 NPEPPSP55786 919 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 ZXDAP98168 799 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 BMS1Q14692 1282 aaKnown RBP21.08■□□□□ 0.97
CDKN3-209ENST00000556102 GLB1LQ6UWU2 654 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 EXOC8Q8IYI6 725 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 SLC7A3Q8WY07 619 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 LPPQ93052 612 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 FBXL18Q96ME1 805 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 FAM105AQ9NUU6 356 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 COL4A3BPQ9Y5P4 624 aa21.08■□□□□ 0.97
CDKN3-209ENST00000556102 ARID2Q68CP9 1835 aa21.07■□□□□ 0.96
CDKN3-209ENST00000556102 TMEM221A6NGB7 291 aa21.07■□□□□ 0.96
CDKN3-209ENST00000556102 M0R296 226 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms