RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 C6orf132Q5T0Z8 1188 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 RINT1Q6NUQ1 792 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 DPY19L2P1Q6NXN4 242 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 BTNL9Q6UXG8 535 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.61□□□□□ -1.19
TDP1-213ENST00000555880 MICALCLQ6ZW33 695 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 RBM46Q8TBY0 533 aaKnown RBP7.61□□□□□ -1.19
TDP1-213ENST00000555880 SCFD2Q8WU76 684 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 CTNNBL1Q8WYA6 563 aaPredicted RBP7.61□□□□□ -1.19
TDP1-213ENST00000555880 NACC1Q96RE7 527 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 NAP1L3Q99457 506 aaPredicted RBP7.61□□□□□ -1.19
TDP1-213ENST00000555880 EPAS1Q99814 870 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 STK33Q9BYT3 514 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 SLITRK6Q9H5Y7 841 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 ARHGEF10LQ9HCE6 1279 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 SIX2Q9NPC8 291 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 KCND2Q9NZV8 630 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 RABGEF1Q9UJ41 708 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 AMFRQ9UKV5 643 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 PLAAQ9Y263 795 aa7.61□□□□□ -1.19
TDP1-213ENST00000555880 COL11A2P13942 1736 aaPredicted RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 FRMPD4Q14CM0 1322 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 GOLGA6L10A0A0M3HER8 536 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 F8VZ95 297 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 ZEB2O60315 1214 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ECE2O60344 883 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ENTPD3O75355 529 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ERLIN2O94905 339 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CFBP00751 764 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 POLR2MP0CAP2 368 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 RFX1P22670 979 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 FMO5P49326 533 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ATP1A2P50993 1020 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 PPP2R5CQ13362 524 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 PDCLQ13371 301 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CTTNQ14247 550 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 PPP2R5AQ15172 486 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 PPP2R5EQ16537 467 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SHROOM1Q2M3G4 852 aaPredicted RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 CEP85LQ5SZL2 805 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 TTC19Q6DKK2 380 aaPredicted RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 RUFY4Q6ZNE9 571 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SLFN11Q7Z7L1 901 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SIAH1Q8IUQ4 282 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 FAM178BQ8IXR5 827 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SYCP3Q8IZU3 236 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SH2D3CQ8N5H7 860 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 METTL13Q8N6R0 699 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 PIGOQ8TEQ8 1089 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 RFFLQ8WZ73 363 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 P2RX7Q99572 595 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 AP1M1Q9BXS5 423 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 WDR11Q9BZH6 1224 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CENPHQ9H3R5 247 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 GOPCQ9HD26 462 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 RGL1Q9NZL6 768 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 TMOD2Q9NZR1 351 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ODF2LQ9ULJ1 636 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 PRR12Q9ULL5 1215 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 DIS3Q9Y2L1 958 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 UTP11Q9Y3A2 253 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 FAM169AQ9Y6X4 670 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 BRWD3Q6RI45 1802 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ATRNL1Q5VV63 1379 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ZMYM2Q9UBW7 1377 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 NCANO14594 1321 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ATXN2Q99700 1313 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 SFI1A8K8P3 1242 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 EML1O00423 815 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 DDX3XO00571 662 aaKnown RBP eCLIP7.6□□□□□ -1.19
TDP1-213ENST00000555880 TGFB1I1O43294 461 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 TMEM253P0C7T8 217 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 KRT13P13646 458 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 NMT1P30419 496 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 CTNNA1P35221 906 aaKnown RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 BAG6P46379 1132 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CYP2J2P51589 502 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CDR1P51861 262 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 PRELPP51888 382 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 GALCP54803 685 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ERVK-9P63128 1117 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SETQ01105 290 aaPredicted RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 MYL7Q01449 175 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 EN1Q05925 392 aaPredicted RBP7.6□□□□□ -1.19
TDP1-213ENST00000555880 CETN1Q12798 172 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 BIRC3Q13489 604 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 DACT2Q5SW24 774 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 ODR4Q5SWX8 454 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 EMC10Q5UCC4 262 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 STYK1Q6J9G0 422 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 C1orf186Q6ZWK4 172 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SH3BP5LQ7L8J4 393 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 OTOP1Q7RTM1 612 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 TADA2BQ86TJ2 420 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SPICE1Q8N0Z3 855 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 RASGEF1CQ8N431 466 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 CYP2W1Q8TAV3 490 aa7.6□□□□□ -1.19
TDP1-213ENST00000555880 SLC5A5Q92911 643 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms