RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CBFA2T2O43439 604 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 GAS2O43903 313 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 C6orf222P0C671 652 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 ZNF18P17022 549 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 NPTX2P47972 431 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 DNM2P50570 870 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 NCKAP1LP55160 1127 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 RTP1P59025 263 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 SPAG1Q07617 926 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 KCNJ12Q14500 433 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 PPP2R5AQ15172 486 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 FSCN1Q16658 493 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 BMT2Q1RMZ1 405 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 CDKAL1Q5VV42 579 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 IER5Q5VY09 327 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 FAM114A1Q8IWE2 563 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 DRC7Q8IY82 874 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 BSNDQ8WZ55 320 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 ACCSQ96QU6 501 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 KCTD10Q9H3F6 313 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 TYW1Q9NV66 732 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 KCNG1Q9UIX4 513 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 TRIM17Q9Y577 477 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 COL1A2P08123 1366 aa10.63□□□□□ -0.71
HNRNPC-220ENST00000555585 LRRIQ4A6NIV6 560 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 ZBTB42B2RXF5 422 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 H0YCG3 227 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 PDXKO00764 312 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 MAGEB2O15479 319 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 ZEB2O60315 1214 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 PGK1P00558 417 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 GLRA2P23416 452 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 KLRC1P26715 233 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 ARL2P36404 184 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 PSEN2P49810 448 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 UBASH3AP57075 661 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 GJA9P57773 515 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 KCNA1Q09470 495 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 PPFIA1Q13136 1202 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 MFSD10Q14728 455 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 KIAA0753Q2KHM9 967 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 EFCAB12Q6NXP0 572 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 LRRC71Q8N4P6 559 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 METTL13Q8N6R0 699 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 RETREG2Q8NC44 543 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 DEPTORQ8TB45 409 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 ASAP3Q8TDY4 903 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 SPIRE2Q8WWL2 714 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 TMEM206Q9H813 350 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 SUCLA2Q9P2R7 463 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 KAT6AQ92794 2004 aa10.62□□□□□ -0.71
HNRNPC-220ENST00000555585 DENND3A2RUS2 1198 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 MYADML2A6NDP7 307 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 RRN3P2A6NIE6 340 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 CETN3O15182 167 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 CLIC2O15247 247 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 KPNA6O60684 536 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 PPP1R37O75864 691 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 C22orf31O95567 290 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 F2P00734 622 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 INHAP05111 366 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 TPM3P06753 285 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 TPM2P07951 284 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 RPL13P26373 211 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 EEF1GP26641 437 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 GRK4P32298 578 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 HOXD13P35453 343 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 NAMPTP43490 491 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 MTIF2P46199 727 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 PSEN1P49768 467 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 GTF2BQ00403 316 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 FKBP3Q00688 224 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 ADAM9Q13443 819 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 GRIK4Q16099 956 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 EDRF1Q3B7T1 1238 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 CCDC40Q4G0X9 1142 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 ZCWPW2Q504Y3 356 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 TCP11X2Q5H9J9 407 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 GNASQ5JWF2 1037 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 FOXR2Q6PJQ5 311 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 MTHFD1LQ6UB35 978 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 HS2ST1Q7LGA3 356 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 TMEM161BQ8NDZ6 487 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 PRPF31Q8WWY3 499 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 PSPC1Q8WXF1 523 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 KAT2BQ92831 832 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 HVCN1Q96D96 273 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 ZBTB10Q96DT7 871 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 EEF2KMTQ96G04 330 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 MRFAP1L1Q96HT8 127 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 CNOT6LQ96LI5 555 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 CTAGE1Q96RT6 745 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 PPP1R9BQ96SB3 815 aa10.61□□□□□ -0.71
HNRNPC-220ENST00000555585 KIFC3Q9BVG8 833 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms