RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PCDH10Q9P2E7 1040 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 ODF2LQ9ULJ1 636 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 KCNJ18B7U540 433 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 ASGR1P07306 291 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 CYP2C9P11712 490 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 MUTP22033 750 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 GLRA2P23416 452 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 TMOD1P28289 359 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 NLRP11P59045 1033 aaKnown RBP11.21□□□□□ -0.62
NEK9-205ENST00000555405 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 STRN3Q13033 797 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 KCNJ12Q14500 433 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.62
NEK9-205ENST00000555405 RETREG2Q8NC44 543 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 DNAJB3Q8WWF6 145 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 KIFAP3Q92845 792 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 CRACR2AQ9BSW2 395 aa11.21□□□□□ -0.62
NEK9-205ENST00000555405 CETN3O15182 167 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 TREHO43280 583 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 SMIM10L2AP0DMW4 78 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 SMIM10L2BP0DMW5 78 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 CASP4P49662 377 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 MAP7D2Q96T17 732 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 GBP3Q9H0R5 595 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 NRBP1Q9UHY1 535 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 LCTP09848 1927 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 A0A087WZ62 844 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 IGKV6D-21A0A0A0MT36 114 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 RBM47A0AV96 593 aaKnown RBP11.2□□□□□ -0.62
NEK9-205ENST00000555405 A6NJR5 290 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 UVSSAQ2YD98 709 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 FILIP1LQ4L180 1135 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 POMGNT1Q8WZA1 660 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 CCDC127Q96BQ5 260 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
NEK9-205ENST00000555405 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
NEK9-205ENST00000555405 DUSP9Q99956 384 aaKnown RBP11.2□□□□□ -0.62
NEK9-205ENST00000555405 FDXACB1Q9BRP7 624 aaPredicted RBP11.2□□□□□ -0.62
NEK9-205ENST00000555405 TARS2Q9BW92 718 aaKnown RBP11.2□□□□□ -0.62
NEK9-205ENST00000555405 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 LIG4P49917 911 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 LAMTOR4Q0VGL1 99 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 FAM84AQ96KN4 292 aa11.2□□□□□ -0.62
NEK9-205ENST00000555405 KAT6AQ92794 2004 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 FAM170AA1A519 330 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 TEX33O43247 280 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 SLC26A4O43511 780 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 LGR5O75473 907 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 TTI2Q6NXR4 508 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 LMBR1Q8WVP7 490 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 ACCSQ96QU6 501 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 NOC4LQ9BVI4 516 aaKnown RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 DHX33Q9H6R0 707 aaKnown RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 ADGRA3Q8IWK6 1321 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 EVPLQ92817 2033 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 IKBKBO14920 756 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 TPM2P07951 284 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 ZNF75DP51815 510 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 UBXN1Q04323 297 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 RNF180Q86T96 592 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 AFAP1L1Q8TED9 768 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 KAT2BQ92831 832 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 DDX20Q9UHI6 824 aaKnown RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 CEP290O15078 2479 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 ANKRD63C9JTQ0 380 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 CALUO43852 315 aaPredicted RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 ZEB2O60315 1214 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 MAFO75444 373 aaPredicted RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 FKBP3Q00688 224 aaKnown RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 CAPSQ13938 189 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 KRT31Q15323 416 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 CCDC155Q8N6L0 562 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 OSMRQ99650 979 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
NEK9-205ENST00000555405 RNF19AQ9NV58 838 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 KCND2Q9NZV8 630 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 PCDHA2Q9Y5H9 948 aa11.19□□□□□ -0.62
NEK9-205ENST00000555405 NR3C1P04150 777 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 RFC5P40937 340 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 ENOX2Q16206 610 aaKnown RBP11.18□□□□□ -0.62
NEK9-205ENST00000555405 IER5Q5VY09 327 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 ZBTB8OSQ8IWT0 167 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 THNSL1Q8IYQ7 743 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 HSPA1AP0DMV8 641 aaKnown RBP11.18□□□□□ -0.62
NEK9-205ENST00000555405 HSPA1BP0DMV9 641 aaKnown RBP11.18□□□□□ -0.62
NEK9-205ENST00000555405 ACOT2P49753 483 aa11.18□□□□□ -0.62
NEK9-205ENST00000555405 SLC26A2P50443 739 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms