RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SMAD5Q99717 465 aaKnown RBP7.22□□□□□ -1.25
VRK1-205ENST00000555402 AURKAIP1Q9NWT8 199 aaPredicted RBP7.22□□□□□ -1.25
VRK1-205ENST00000555402 TCEAL9Q9UHQ7 104 aa7.22□□□□□ -1.25
VRK1-205ENST00000555402 SLC12A8A0AV02 714 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 ACOT7O00154 380 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 NKRFO15226 690 aaKnown RBP eCLIP7.21□□□□□ -1.26
VRK1-205ENST00000555402 ALDH1L1O75891 902 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 ATP2A2P16615 1042 aaKnown RBP7.21□□□□□ -1.26
VRK1-205ENST00000555402 LSSP48449 732 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 MECP2P51608 486 aaKnown RBP7.21□□□□□ -1.26
VRK1-205ENST00000555402 EPHA5P54756 1037 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 JAM2P57087 298 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 NFYCQ13952 458 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 TBR1Q16650 682 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 DPP8Q6V1X1 898 aaPredicted RBP7.21□□□□□ -1.26
VRK1-205ENST00000555402 ARHGAP36Q6ZRI8 547 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 NOL8Q76FK4 1167 aaKnown RBP7.21□□□□□ -1.26
VRK1-205ENST00000555402 CLIP3Q96DZ5 547 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 PRRX2Q99811 253 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 PUS7LQ9H0K6 701 aaKnown RBP7.21□□□□□ -1.26
VRK1-205ENST00000555402 SLC39A2Q9NP94 309 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 SPTLC3Q9NUV7 552 aa7.21□□□□□ -1.26
VRK1-205ENST00000555402 H7C1D1 291 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 KCNK3O14649 394 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 ARHGAP6O43182 974 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 RAMP2O60895 175 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 MSX2P35548 267 aaPredicted RBP7.2□□□□□ -1.26
VRK1-205ENST00000555402 LACTBP83111 547 aaPredicted RBP7.2□□□□□ -1.26
VRK1-205ENST00000555402 GPR19Q15760 415 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
VRK1-205ENST00000555402 HDGFL2Q7Z4V5 671 aaPredicted RBP7.2□□□□□ -1.26
VRK1-205ENST00000555402 ULK2Q8IYT8 1036 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 CNTD1Q8N815 330 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 VOPP1Q96AW1 172 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 BOCQ9BWV1 1114 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 CCDC8Q9H0W5 538 aaPredicted RBP7.2□□□□□ -1.26
VRK1-205ENST00000555402 PLA2G3Q9NZ20 509 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 CEP72Q9P209 647 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 CHPF2Q9P2E5 772 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 PUF60Q9UHX1 559 aaKnown RBP7.2□□□□□ -1.26
VRK1-205ENST00000555402 DSEQ9UL01 958 aa7.2□□□□□ -1.26
VRK1-205ENST00000555402 ZNF561-AS1K7EIQ3 104 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 ETV4P43268 484 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 ZNF174Q15697 407 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 PTRH1Q86Y79 214 aaKnown RBP7.19□□□□□ -1.26
VRK1-205ENST00000555402 FMNL3Q8IVF7 1028 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 CFHR4Q92496 578 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 ASPSCR1Q9BZE9 553 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 EMC7Q9NPA0 242 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 OXSMQ9NWU1 459 aa7.19□□□□□ -1.26
VRK1-205ENST00000555402 H2AFY2Q9P0M6 372 aaPredicted RBP7.19□□□□□ -1.26
VRK1-205ENST00000555402 THRAP3Q9Y2W1 955 aaKnown RBP7.19□□□□□ -1.26
VRK1-205ENST00000555402 REXO2Q9Y3B8 237 aaKnown RBP7.19□□□□□ -1.26
VRK1-205ENST00000555402 HIP1RO75146 1068 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 ULK1O75385 1050 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 AMY2AP04746 511 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 KRT4P19013 534 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 AMY2BP19961 511 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 IRF9Q00978 393 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 TTF1Q15361 905 aaPredicted RBP7.18□□□□□ -1.26
VRK1-205ENST00000555402 KCTD1Q719H9 257 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 SGMS1Q86VZ5 419 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 PASD1Q8IV76 773 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 SMURF1Q9HCE7 757 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 MSL2Q9HCI7 577 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 SLC2A4RGQ9NR83 387 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 EID1Q9Y6B2 187 aa7.18□□□□□ -1.26
VRK1-205ENST00000555402 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.17□□□□□ -1.26
VRK1-205ENST00000555402 DBPQ10586 325 aaPredicted RBP7.17□□□□□ -1.26
VRK1-205ENST00000555402 FAPQ12884 760 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 DDB1Q16531 1140 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 Q6ZPA2 131 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 OTOP1Q7RTM1 612 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 ZDHHC5Q9C0B5 715 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 TRHDEQ9UKU6 1024 aa7.17□□□□□ -1.26
VRK1-205ENST00000555402 TCRBV5S4A2TA0A5A2 114 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 SCDO00767 359 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 PRKD3O94806 890 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 SLC9A1P19634 815 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 LMO1P25800 156 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 EPHB1P54762 984 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 HHEXQ03014 270 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 GRM7Q14831 915 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 WDR72Q3MJ13 1102 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 SYDE2Q5VT97 1194 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 USP30Q70CQ3 517 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 LARP4Q71RC2 724 aaKnown RBP eCLIP7.16□□□□□ -1.26
VRK1-205ENST00000555402 TMPRSS6Q8IU80 811 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 NLGN4XQ8N0W4 816 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 EFHBQ8N7U6 833 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 SLC5A5Q92911 643 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 TTPALQ9BTX7 342 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 CD244Q9BZW8 370 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 NELFAQ9H3P2 528 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 PARPBPQ9NWS1 579 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 GIT1Q9Y2X7 761 aa7.16□□□□□ -1.26
VRK1-205ENST00000555402 NEK2P51955 445 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 COL10A1Q03692 680 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms