RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 NELFBQ8WX92 580 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
TDP1-211ENST00000555178 TSEN34Q9BSV6 310 aaKnown RBP11.89□□□□□ -0.51
TDP1-211ENST00000555178 HSD3B7Q9H2F3 369 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 MINDY3Q9H8M7 445 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 KCND2Q9NZV8 630 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 ODF2LQ9ULJ1 636 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 COL4A3BPQ9Y5P4 624 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
TDP1-211ENST00000555178 C17orf102A2RUQ5 167 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 TISP43B9A030 160 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 KBTBD13C9JR72 458 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 ZEB2O60315 1214 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 B4GALT4O60513 344 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 KPNA6O60684 536 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 PRPF6O94906 941 aaKnown RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 IQCF3P0C7M6 154 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 CYP2C9P11712 490 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 NPTX2P47972 431 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 SCFD1Q8WVM8 642 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 SLC7A3Q8WY07 619 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 CCDC47Q96A33 483 aaKnown RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 MRPL44Q9H9J2 332 aaKnown RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 STARD7Q9NQZ5 370 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 SUCLA2Q9P2R7 463 aaPredicted RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 NRCAMQ92823 1304 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 COL1A2P08123 1366 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 MOXD2PA6NHM9 499 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 GCNT3O95395 438 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 SRGAP2CP0DJJ0 459 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 COL6A1P12109 1028 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 RFC5P40937 340 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 LAMTOR4Q0VGL1 99 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 PAK1Q13153 545 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 SLC43A3Q8NBI5 491 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 GLT1D1Q96MS3 346 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 BPIFA3Q9BQP9 254 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 KATNAL1Q9BW62 490 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
TDP1-211ENST00000555178 SEMA6BQ9H3T3 888 aa11.88□□□□□ -0.51
TDP1-211ENST00000555178 ATP1A3P13637 1013 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 PLS3P13797 630 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 FGFR4P22455 802 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 CDK7P50613 346 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 KIZQ2M2Z5 673 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 A0A087WZ62 844 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 CCDC169A6NNP5 214 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 BECN2A8MW95 431 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 MYL5Q02045 173 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 PTGISQ16647 500 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
TDP1-211ENST00000555178 ZNF720Q7Z2F6 126 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 MCPH1Q8NEM0 835 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 TMEM40Q8WWA1 233 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 DRC1Q96MC2 740 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 NLRP4Q96MN2 994 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 FDXACB1Q9BRP7 624 aaPredicted RBP11.87□□□□□ -0.51
TDP1-211ENST00000555178 STRA6Q9BX79 667 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 OLFML3Q9NRN5 406 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 SAMSN1Q9NSI8 373 aaKnown RBP11.87□□□□□ -0.51
TDP1-211ENST00000555178 FANCLQ9NW38 375 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 NFE2L3Q9Y4A8 694 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 ZMYM2Q9UBW7 1377 aa11.87□□□□□ -0.51
TDP1-211ENST00000555178 RRN3P2A6NIE6 340 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 K7ENM7 598 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 ARVCFO00192 962 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 PPP1R37O75864 691 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 GAP43P17677 238 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 PLCB2Q00722 1185 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 PSMD2Q13200 908 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 TRIM71Q2Q1W2 868 aaKnown RBP11.86□□□□□ -0.51
TDP1-211ENST00000555178 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 SESTD1Q86VW0 696 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 TMEM161BQ8NDZ6 487 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 ZSWIM2Q8NEG5 633 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 AKT3Q9Y243 479 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 TRIP11Q15643 1979 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 LRRIQ4A6NIV6 560 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 GPR32O75388 356 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 CAVIN2O95810 425 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 CTSHP09668 335 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 ERCC5P28715 1186 aaPredicted RBP11.86□□□□□ -0.51
TDP1-211ENST00000555178 MRE11P49959 708 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 NCKAP1LP55160 1127 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
TDP1-211ENST00000555178 IER5Q5VY09 327 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 TTI2Q6NXR4 508 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 SLC39A5Q6ZMH5 540 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 HAUS6Q7Z4H7 955 aa11.86□□□□□ -0.51
TDP1-211ENST00000555178 SERINC5Q86VE9 423 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms