RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
SHMT2-215ENST00000554656 TBC1D8BQ0IIM8 1120 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 CBX2Q14781 532 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-215ENST00000554656 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 MTERF2Q49AM1 385 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 KCNT2Q6UVM3 1135 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 MIER3Q7Z3K6 550 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 BLIDQ8IZY5 108 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 MICAL1Q8TDZ2 1067 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 MRPS27Q92552 414 aaKnown RBP11.89□□□□□ -0.51
SHMT2-215ENST00000554656 NIFKQ9BYG3 293 aaKnown RBP11.89□□□□□ -0.51
SHMT2-215ENST00000554656 NRBP2Q9NSY0 501 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-215ENST00000554656 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-215ENST00000554656 CDH22Q9UJ99 828 aa11.89□□□□□ -0.51
SHMT2-215ENST00000554656 A0A0U1RQF3 1178 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 EML1O00423 815 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 DEXIO95424 95 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 TMOD1P28289 359 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 STK3Q13188 491 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 SYCE2Q6PIF2 218 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 SLC39A11Q8N1S5 342 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 RNF169Q8NCN4 708 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 HELQQ8TDG4 1101 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-215ENST00000554656 FBXL18Q96ME1 805 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 CDCA3Q99618 268 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-215ENST00000554656 TCF25Q9BQ70 676 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 S1PR5Q9H228 398 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 KCNJ14Q9UNX9 436 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 DENND4AQ7Z401 1863 aa11.88□□□□□ -0.51
SHMT2-215ENST00000554656 MYO10Q9HD67 2058 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 A0A087WZ62 844 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 MEIS3P2A8K0S8 358 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 HOXA2O43364 376 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 B4GALT3O60512 393 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 INF2Q27J81 1249 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 XKR3Q5GH77 459 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 PLA2G4FQ68DD2 849 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 ANKRD54Q6NXT1 300 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 MOXD1Q6UVY6 613 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 TMEM184AQ6ZMB5 413 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 ANO5Q75V66 913 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 TMEM173Q86WV6 379 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 KSR1Q8IVT5 923 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 NLRP7Q8WX94 980 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 EDAQ92838 391 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 SCLT1Q96NL6 688 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 FDXACB1Q9BRP7 624 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 APOL5Q9BWW9 433 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 PHF7Q9BWX1 381 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 GJB4Q9NTQ9 266 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 SPG21Q9NZD8 308 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-215ENST00000554656 VAV3Q9UKW4 847 aa11.87□□□□□ -0.51
SHMT2-215ENST00000554656 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 PDIA4P13667 645 aaKnown RBP11.86□□□□□ -0.51
SHMT2-215ENST00000554656 PPM1AP35813 382 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 TECP42680 631 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 NHLH1Q02575 133 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHMT2-215ENST00000554656 LLGL2Q6P1M3 1020 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 ABI1Q8IZP0 508 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 FEZF2Q8TBJ5 459 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-215ENST00000554656 LPPQ93052 612 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 PHF20Q9BVI0 1012 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 SLKQ9H2G2 1235 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-215ENST00000554656 KCNMB3Q9NPA1 279 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
SHMT2-215ENST00000554656 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-215ENST00000554656 C2orf16Q68DN1 1984 aa11.86□□□□□ -0.51
SHMT2-215ENST00000554656 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 TMEM221A6NGB7 291 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 DDX11L8A8MPP1 907 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 M0R296 226 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 CPLX1O14810 134 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 MAFO75444 373 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-215ENST00000554656 EOMESO95936 686 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 PHKA2P46019 1235 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 NPEPPSP55786 919 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 BCAR1P56945 870 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 NUCB2P80303 420 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 ZXDAP98168 799 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 SCRN1Q12765 414 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 PPP2R5CQ13362 524 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 LONRF3Q496Y0 759 aa11.85□□□□□ -0.51
SHMT2-215ENST00000554656 EARS2Q5JPH6 523 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms