RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 KIF16BQ96L93 1317 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 DDAH1O94760 285 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 CYP2B6P20813 491 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 FGFR2P21802 821 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 RGS3P49796 1198 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 NMIQ13287 307 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-228ENST00000554592 KCNMB1Q16558 191 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 LRRC26Q2I0M4 334 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 LRRC24Q50LG9 513 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 TREML2Q5T2D2 321 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 MRM1Q6IN84 353 aaKnown RBP6.01□□□□□ -1.45
ATXN3-228ENST00000554592 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 SYTL5Q8TDW5 730 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-228ENST00000554592 KLHL6Q8WZ60 621 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 CCDC120Q96HB5 630 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 KAZALD1Q96I82 304 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 KIRREL1Q96J84 757 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 ZNF512BQ96KM6 892 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-228ENST00000554592 SLC6A18Q96N87 628 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 GNL3LQ9NVN8 582 aaKnown RBP6.01□□□□□ -1.45
ATXN3-228ENST00000554592 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 LAMB1P07942 1786 aa6.01□□□□□ -1.45
ATXN3-228ENST00000554592 IL16Q14005 1332 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 TLDC2A0PJX2 215 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 PDPK1O15530 556 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 CLEC3AO75596 197 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 GLI1P08151 1106 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 CACNB2Q08289 660 aaPredicted RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 SPP2Q13103 211 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 RABL6Q3YEC7 729 aaPredicted RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 VHLLQ6RSH7 139 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 JAZF1Q86VZ6 243 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 PPFIBP1Q86W92 1011 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 DAGLBQ8NCG7 672 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 GPRC5AQ8NFJ5 357 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 LINC01599Q8WXQ3 324 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 TRIB2Q92519 343 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 LPIN2Q92539 896 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 G6PC3Q9BUM1 346 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 SENP6Q9GZR1 1112 aaPredicted RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 SUCOQ9UBS9 1254 aaKnown RBP6□□□□□ -1.45
ATXN3-228ENST00000554592 MORF4L1Q9UBU8 362 aa6□□□□□ -1.45
ATXN3-228ENST00000554592 ATRNL1Q5VV63 1379 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 DDTLA6NHG4 134 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 C9IYK1 514 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 C8AP07357 584 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SLC5A1P13866 664 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 ZKSCAN1P17029 563 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 PRDX5P30044 214 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 MAPK4P31152 587 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 HOXA7P31268 230 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 RGS2P41220 211 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 HK2P52789 917 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SMAD3P84022 425 aaKnown RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SLC7A5Q01650 507 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 DDX10Q13206 875 aaKnown RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 NCAPHQ15003 741 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SHHQ15465 462 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 GNPTABQ3T906 1256 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 KIAA1211LQ6NV74 962 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SLC4A10Q6U841 1118 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 CCAR1Q8IX12 1150 aaKnown RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 MYLIPQ8WY64 445 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 USP6NLQ92738 828 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 TCTN2Q96GX1 697 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 DHRS1Q96LJ7 313 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 P2RX7Q99572 595 aaKnown RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-228ENST00000554592 DENND2AQ9ULE3 1009 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 UTYO14607 1347 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 SALL1Q9NSC2 1324 aa5.99□□□□□ -1.45
ATXN3-228ENST00000554592 TMEM82A0PJX8 343 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 NOTOA8MTQ0 251 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 EYA2O00167 538 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 SHOXO15266 292 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 MSCO60682 206 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 PRAMEF1O95521 474 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 FOSL2P15408 326 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 CCND3P30281 292 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 HMGCS2P54868 508 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 NR0B2Q15466 257 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 TIGD5Q53EQ6 642 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 TMEM67Q5HYA8 995 aa5.98□□□□□ -1.45
ATXN3-228ENST00000554592 ZNF648Q5T619 568 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
ATXN3-228ENST00000554592 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms