RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 KRT83P78385 493 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 KRT76Q01546 638 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 NEK9Q8TD19 979 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 GOLGA1Q92805 767 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 KAT2BQ92831 832 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 ELMO3Q96BJ8 720 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 FAM84AQ96KN4 292 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 GANQ9H2C0 597 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 LARSQ9P2J5 1176 aaKnown RBP12.75□□□□□ -0.37
SHMT2-212ENST00000554467 SEPT9Q9UHD8 586 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-212ENST00000554467 FAM184BQ9ULE4 1060 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 PCDHA13Q9Y5I0 950 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 PHACTR2O75167 634 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 ATP1A1P05023 1023 aaKnown RBP12.75□□□□□ -0.37
SHMT2-212ENST00000554467 EPHX2P34913 555 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 OAZ1P54368 228 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 DLG4P78352 724 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
SHMT2-212ENST00000554467 PPM1EQ8WY54 764 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 BSNDQ8WZ55 320 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CAPZA3Q96KX2 299 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 PNKPQ96T60 521 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 NAPGQ99747 312 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-212ENST00000554467 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
SHMT2-212ENST00000554467 CPP00450 1065 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 PSMC2P35998 433 aaKnown RBP12.74□□□□□ -0.37
SHMT2-212ENST00000554467 JAK3P52333 1124 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 ACTR2P61160 394 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SKIDA1Q1XH10 827 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 HAUS6Q7Z4H7 955 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
SHMT2-212ENST00000554467 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 PSMB7Q99436 277 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-212ENST00000554467 CEP350Q5VT06 3117 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 MOCS3O95396 460 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 PLS3P13797 630 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 UCHL3P15374 230 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 GPRASP2Q96D09 838 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SPAG5Q96R06 1193 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SALL4Q9UJQ4 1053 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 DBR1Q9UK59 544 aaKnown RBP12.74□□□□□ -0.37
SHMT2-212ENST00000554467 MYH10P35580 1976 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 BUB1O43683 1085 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 MUTP22033 750 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 HOXA7P31268 230 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-212ENST00000554467 HNRNPH3P31942 346 aaKnown RBP12.74□□□□□ -0.37
SHMT2-212ENST00000554467 MTERF2Q49AM1 385 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 C4orf19Q8IY42 314 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 BORCS6Q96GS4 357 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 SEL1LQ9UBV2 794 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 ADAMTS1Q9UHI8 967 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 FRMD4BQ9Y2L6 1034 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 CAPN6Q9Y6Q1 641 aa12.74□□□□□ -0.37
SHMT2-212ENST00000554467 OTOFQ9HC10 1997 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 CCDC151A5D8V7 595 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 PPP1R37O75864 691 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 DNA2P51530 1060 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 PRKCEQ02156 737 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 KIF5AQ12840 1032 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 Q3C1V9 767 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 DNAJC21Q5F1R6 531 aaKnown RBP12.73□□□□□ -0.37
SHMT2-212ENST00000554467 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 SAAL1Q96ER3 474 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 PACSIN1Q9BY11 444 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 WDR90Q96KV7 1748 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 RBAK-RBAKDNI3L0D1 243 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 KRT86O43790 486 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 MAGEA1P43355 309 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 VAV2P52735 878 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 KLHL30Q0D2K2 578 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 DPY19L2P1Q6NXN4 242 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 PTPRFP10586 1907 aa12.73□□□□□ -0.37
SHMT2-212ENST00000554467 SFNP31947 248 aa12.72□□□□□ -0.37
SHMT2-212ENST00000554467 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
SHMT2-212ENST00000554467 STXBP2Q15833 593 aa12.72□□□□□ -0.37
SHMT2-212ENST00000554467 GPR162Q16538 588 aa12.72□□□□□ -0.37
SHMT2-212ENST00000554467 PTPROQ16827 1216 aa12.72□□□□□ -0.37
SHMT2-212ENST00000554467 SLC9C1Q4G0N8 1177 aa12.72□□□□□ -0.37
SHMT2-212ENST00000554467 ZNF746Q6NUN9 644 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-212ENST00000554467 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms