RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 RALBP1Q15311 655 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 LMBR1LQ6UX01 489 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 LCNL1Q6ZST4 164 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 SYDE1Q6ZW31 735 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-226ENST00000554350 ADSSL1Q8N142 457 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 WDR66Q8TBY9 1149 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 ACSF2Q96CM8 615 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-226ENST00000554350 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 DUSP9Q99956 384 aaKnown RBP6.97□□□□□ -1.29
ATXN3-226ENST00000554350 FSD1Q9BTV5 496 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 DUSP15Q9H1R2 295 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-226ENST00000554350 HIPK3Q9H422 1215 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 SLAMF8Q9P0V8 285 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 CACNA1HO95180 2353 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 KMT2BQ9UMN6 2715 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-226ENST00000554350 ZBED9Q6R2W3 1325 aa6.97□□□□□ -1.29
ATXN3-226ENST00000554350 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 KIF28PB7ZC32 967 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 C19orf81C9J6K1 198 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 CNMDO75829 334 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 PGRP06401 933 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 C1QTNF9P0C862 333 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 PRDX5P30044 214 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 ZYXQ15942 572 aaKnown RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 KCNA10Q16322 511 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 GAB4Q2WGN9 574 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 METTL24Q5JXM2 366 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 CCDC30Q5VVM6 783 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 SLC6A19Q695T7 634 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 MPZL3Q6UWV2 235 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 ADHFE1Q8IWW8 467 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 RPUSD2Q8IZ73 545 aaKnown RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 PIWIL2Q8TC59 973 aaKnown RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 EDAQ92838 391 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 IDI2Q9BXS1 227 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 PUS3Q9BZE2 481 aaKnown RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 SP110Q9HB58 689 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 DDX4Q9NQI0 724 aaKnown RBP6.96□□□□□ -1.3
ATXN3-226ENST00000554350 MTUS1Q9ULD2 1270 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 ATAD5Q96QE3 1844 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 TECTAO75443 2155 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 NCOR2Q9Y618 2525 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 UMODL1Q5DID0 1318 aa6.96□□□□□ -1.3
ATXN3-226ENST00000554350 A0A0U1RQG5 324 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-226ENST00000554350 SRFP11831 508 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 CYP7A1P22680 504 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 VCPP55072 806 aaKnown RBP6.95□□□□□ -1.3
ATXN3-226ENST00000554350 CASP7P55210 303 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 FOXO4P98177 505 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 HERC4Q5GLZ8 1057 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-226ENST00000554350 TMPRSS7Q7RTY8 843 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 TTC6Q86TZ1 520 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 RMDN1Q96DB5 314 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 PPP1R16BQ96T49 567 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 FEZ1Q99689 392 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 PRKAG3Q9UGI9 489 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 TLR6Q9Y2C9 796 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 COL4A4P53420 1690 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-226ENST00000554350 PLXNA3P51805 1871 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 RFX7Q2KHR2 1363 aa6.95□□□□□ -1.3
ATXN3-226ENST00000554350 SMCHD1A6NHR9 2005 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 ACACBO00763 2458 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 PROB1E7EW31 1015 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 ARVCFO00192 962 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 LPXNO60711 386 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 AKR1A1P14550 325 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
ATXN3-226ENST00000554350 RRP1BQ14684 758 aaKnown RBP6.94□□□□□ -1.3
ATXN3-226ENST00000554350 DEFB128Q7Z7B8 93 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 NKD2Q969F2 451 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-226ENST00000554350 SCLYQ96I15 445 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 STK31Q9BXU1 1019 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 MIR1-1HGQ9H1L0 117 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 NSUN3Q9H649 340 aaKnown RBP6.94□□□□□ -1.3
ATXN3-226ENST00000554350 MRS2Q9HD23 443 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 BTBD7Q9P203 1132 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 TMEM59LQ9UK28 342 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 ADAM30Q9UKF2 790 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 CORINQ9Y5Q5 1042 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 MROH5Q6ZUA9 1318 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 SYNRGQ9UMZ2 1314 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 TRANK1O15050 2925 aa6.94□□□□□ -1.3
ATXN3-226ENST00000554350 STRNO43815 780 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 HPXP02790 462 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 ASNSP08243 561 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 CTSHP09668 335 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 IFIT1P09914 478 aaKnown RBP6.93□□□□□ -1.3
ATXN3-226ENST00000554350 C6orf222P0C671 652 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-226ENST00000554350 ACTN1P12814 892 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 AVPR2P30518 371 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 ETV3P41162 512 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 BTDP43251 543 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 CDK7P50613 346 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 PLS1Q14651 629 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 CLUL1Q15846 466 aa6.93□□□□□ -1.3
ATXN3-226ENST00000554350 TSNAXIP1Q2TAA8 658 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms