RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RIPK4P57078 832 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 FANCCQ00597 558 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 TNIP1Q15025 636 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 DPY19L1Q2PZI1 675 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 WWC2Q6AWC2 1192 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 DDX46Q7L014 1031 aaKnown RBP4.12□□□□□ -1.75
SLIRP-202ENST00000553981 SUPT20HQ8NEM7 779 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 ZBTB8AQ96BR9 441 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 DDX11Q96FC9 970 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 CLMNQ96JQ2 1002 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 BCL11AQ9H165 835 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 SMPD4Q9NXE4 827 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 BACE2Q9Y5Z0 518 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 A0A1B0GUL6 1792 aa4.12□□□□□ -1.75
SLIRP-202ENST00000553981 IGKV5-2P06315 115 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 EPHX1P07099 455 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF853P0CG23 659 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 TNFRSF1AP19438 455 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 EN2P19622 333 aaPredicted RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 CTGFP29279 349 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 SEPHS1P49903 392 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 CASP7P55210 303 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 RPS8P62241 208 aaKnown RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 RACK1P63244 317 aaKnown RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 SMAD4Q13485 552 aaKnown RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 PRKG1Q13976 671 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 GNPTABQ3T906 1256 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 HABP4Q5JVS0 413 aaKnown RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 DACT2Q5SW24 774 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 HEATR6Q6AI08 1181 aaKnown RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 CCDC81Q6ZN84 652 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 G2E3Q7L622 706 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 OTOP1Q7RTM1 612 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 CERS5Q8N5B7 392 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 TSPYL6Q8N831 410 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 LINC00482Q8N8I6 264 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 C2orf69Q8N8R5 385 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 PLBD2Q8NHP8 589 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 ADAMTS17Q8TE56 1095 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 PNISRQ8TF01 805 aaKnown RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 CFAP53Q96M91 514 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 FGD4Q96M96 766 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 PTPN18Q99952 460 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 GORASP1Q9BQQ3 440 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 BACH2Q9BYV9 841 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 GBP3Q9H0R5 595 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 MYOZ2Q9NPC6 264 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 CGGBP1Q9UFW8 167 aaPredicted RBP4.11□□□□□ -1.75
SLIRP-202ENST00000553981 PCDHB10Q9UN67 800 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 NUDCQ9Y266 331 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 OTOFQ9HC10 1997 aa4.11□□□□□ -1.75
SLIRP-202ENST00000553981 BRCA2P51587 3418 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 RBBP6Q7Z6E9 1792 aaKnown RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 NPHP3-ACAD11A0A0J9YXS1 232 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 C7orf72A4D263 438 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 ELL2O00472 640 aaPredicted RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 MATN3O15232 486 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 SMARCA5O60264 1052 aaPredicted RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 PPM1BO75688 479 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 UFL1O94874 794 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 NTRK1P04629 796 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 C8BP07358 591 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 CYP2C8P10632 490 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 PAMP19021 973 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 RPS12P25398 132 aaKnown RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 AMPD2Q01433 879 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 CCDC184Q52MB2 194 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 ADAT2Q7Z6V5 191 aaKnown RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 C8orf58Q8NAV2 365 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 USP33Q8TEY7 942 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 DCPSQ96C86 337 aaKnown RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 MYD88Q99836 296 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 SYT3Q9BQG1 590 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 GREM2Q9H772 168 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 METTL5Q9NRN9 209 aaKnown RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 SIT1Q9Y3P8 196 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 SLC12A7Q9Y666 1083 aa4.1□□□□□ -1.75
SLIRP-202ENST00000553981 MKI67P46013 3256 aaKnown RBP4.1□□□□□ -1.75
SLIRP-202ENST00000553981 PDE4DIPQ5VU43 2346 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 A0A1W2PQH9 124 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 AKAP8O43823 692 aaKnown RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 PLATP00750 562 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 FUCA1P04066 466 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 ZNF16P17020 682 aaPredicted RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 ZXDAP98168 799 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 SLC7A5Q01650 507 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 GRB10Q13322 594 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 HSP90AB3PQ58FF7 597 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 CPZQ66K79 652 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 FBXO46Q6PJ61 603 aaPredicted RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 ARHGEF39Q8N4T4 335 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 ZBTB38Q8NAP3 1195 aaPredicted RBP4.09□□□□□ -1.75
SLIRP-202ENST00000553981 AGBL3Q8NEM8 1001 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 TTLL11Q8NHH1 800 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 CD99L2Q8TCZ2 262 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 KLHL6Q8WZ60 621 aa4.09□□□□□ -1.75
SLIRP-202ENST00000553981 SAMD11Q96NU1 681 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms