RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 MARK3P27448 753 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 CBWD6Q4V339 395 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 CBWD3Q5JTY5 395 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 CBWD5Q5RIA9 395 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 STXBP4Q6ZWJ1 553 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 OTUD6AQ7L8S5 288 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 TMEM161BQ8NDZ6 487 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 LACRTQ9GZZ8 138 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 GUCA1BQ9UMX6 200 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 FHOD1Q9Y613 1164 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 UBE4BO95155 1302 aa13.95□□□□□ -0.18
VIPAS39-206ENST00000553888 RBAK-RBAKDNI3L0D1 243 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 RRP9O43818 475 aaKnown RBP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 GTF2F1P35269 517 aaKnown RBP eCLIP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 GTF2BQ00403 316 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 HSDL1Q3SXM5 330 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 ZNF569Q5MCW4 686 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 PHLPP2Q6ZVD8 1323 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 FAM170AA1A519 330 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 ATG7O95352 703 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 FAM84AQ96KN4 292 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 ACCSQ96QU6 501 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 KMT5AQ9NQR1 393 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 GCNT4Q9P109 453 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 CEP72Q9P209 647 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 MAFBQ9Y5Q3 323 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 CASQ1P31415 396 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 TCF7P36402 384 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 DMP1Q13316 513 aaPredicted RBP13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 EXOC3L4Q17RC7 722 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 HGSNATQ68CP4 663 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 SLC35F6Q8N357 371 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 PLEKHO2Q8TD55 490 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 ZBTB10Q96DT7 871 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 PTPN18Q99952 460 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 SIX2Q9NPC8 291 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 FRMD4BQ9Y2L6 1034 aa13.94□□□□□ -0.18
VIPAS39-206ENST00000553888 EVPLQ92817 2033 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 GOLGA6L9A6NEM1 432 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 OATP04181 439 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 ADSSP30520 456 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 EMC2Q15006 297 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 CCDC42Q96M95 316 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 MLXIPQ9HAP2 919 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 DDX41Q9UJV9 622 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 TBX20Q9UMR3 447 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 HNRNPH3P31942 346 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 KIF11P52732 1056 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 POLGP54098 1239 aaPredicted RBP13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 DRP2Q13474 957 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 TDRD12Q587J7 1177 aaKnown RBP13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 TAS1R3Q7RTX0 852 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 DNAAF5Q86Y56 855 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 ZNF710Q8N1W2 664 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 ATP6V0A4Q9HBG4 840 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 HSPBP1Q9NZL4 362 aa13.93□□□□□ -0.18
VIPAS39-206ENST00000553888 ADRB2P07550 413 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 NFIL3Q16649 462 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 KLHDC7AQ5VTJ3 777 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 CST9Q5W186 159 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 KIAA1328Q86T90 577 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 CTIFO43310 598 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 DGAT1O75907 488 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 MAPTP10636 758 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 CETPP11597 493 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 UCHL3P15374 230 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 FMO5P49326 533 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 SFMBT2Q5VUG0 894 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 CBWD2Q8IUF1 395 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 TMEM206Q9H813 350 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 L2HGDHQ9H9P8 463 aa13.92□□□□□ -0.18
VIPAS39-206ENST00000553888 IGKV6D-21A0A0A0MT36 114 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 DYNC1I1O14576 645 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 STAT5BP51692 787 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 BFSP1Q12934 665 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 CEP89Q96ST8 783 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 DEF6Q9H4E7 631 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 MROH8Q9H579 483 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 EIF3CLB5ME19 914 aaKnown RBP13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 KIF5CO60282 957 aa13.91□□□□□ -0.18
VIPAS39-206ENST00000553888 ADORA2AP29274 412 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms